Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.43□□□□□ -0.1
Cdhr3Q8BL00 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cdhr3Q8BL00 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdhr3Q8BL00 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdhr3Q8BL00 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.43□□□□□ -0.1
Cdhr3Q8BL00 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Cdhr3Q8BL00 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdhr3Q8BL00 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdhr3Q8BL00 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdhr3Q8BL00 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdhr3Q8BL00 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdhr3Q8BL00 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdhr3Q8BL00 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdhr3Q8BL00 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdhr3Q8BL00 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdhr3Q8BL00 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdhr3Q8BL00 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdhr3Q8BL00 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdhr3Q8BL00 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cdhr3Q8BL00 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdhr3Q8BL00 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdhr3Q8BL00 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdhr3Q8BL00 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdhr3Q8BL00 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdhr3Q8BL00 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Cdhr3Q8BL00 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Cdhr3Q8BL00 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.42□□□□□ -0.1
Cdhr3Q8BL00 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdhr3Q8BL00 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdhr3Q8BL00 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdhr3Q8BL00 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cdhr3Q8BL00 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdhr3Q8BL00 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdhr3Q8BL00 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdhr3Q8BL00 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdhr3Q8BL00 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdhr3Q8BL00 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdhr3Q8BL00 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdhr3Q8BL00 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdhr3Q8BL00 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdhr3Q8BL00 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdhr3Q8BL00 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdhr3Q8BL00 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdhr3Q8BL00 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdhr3Q8BL00 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdhr3Q8BL00 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdhr3Q8BL00 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdhr3Q8BL00 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdhr3Q8BL00 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cdhr3Q8BL00 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdhr3Q8BL00 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdhr3Q8BL00 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdhr3Q8BL00 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Cdhr3Q8BL00 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdhr3Q8BL00 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdhr3Q8BL00 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cdhr3Q8BL00 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdhr3Q8BL00 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdhr3Q8BL00 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdhr3Q8BL00 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdhr3Q8BL00 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdhr3Q8BL00 Gm7791-201ENSMUST00000219066 539 ntBASIC14.41□□□□□ -0.1
Cdhr3Q8BL00 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdhr3Q8BL00 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cdhr3Q8BL00 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdhr3Q8BL00 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdhr3Q8BL00 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdhr3Q8BL00 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdhr3Q8BL00 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdhr3Q8BL00 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdhr3Q8BL00 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdhr3Q8BL00 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.41□□□□□ -0.1
Cdhr3Q8BL00 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.4□□□□□ -0.1
Cdhr3Q8BL00 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cdhr3Q8BL00 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdhr3Q8BL00 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Cdhr3Q8BL00 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.4□□□□□ -0.1
Cdhr3Q8BL00 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdhr3Q8BL00 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdhr3Q8BL00 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdhr3Q8BL00 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdhr3Q8BL00 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.4□□□□□ -0.1
Cdhr3Q8BL00 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdhr3Q8BL00 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdhr3Q8BL00 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdhr3Q8BL00 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdhr3Q8BL00 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cdhr3Q8BL00 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdhr3Q8BL00 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cdhr3Q8BL00 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cdhr3Q8BL00 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdhr3Q8BL00 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.4□□□□□ -0.1
Cdhr3Q8BL00 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdhr3Q8BL00 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdhr3Q8BL00 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdhr3Q8BL00 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdhr3Q8BL00 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdhr3Q8BL00 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdhr3Q8BL00 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdhr3Q8BL00 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms