Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
SynbQ8BI41 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SynbQ8BI41 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SynbQ8BI41 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
SynbQ8BI41 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SynbQ8BI41 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
SynbQ8BI41 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SynbQ8BI41 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SynbQ8BI41 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SynbQ8BI41 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SynbQ8BI41 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SynbQ8BI41 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.73■□□□□ 0.11
SynbQ8BI41 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SynbQ8BI41 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.73■□□□□ 0.11
SynbQ8BI41 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SynbQ8BI41 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.73■□□□□ 0.11
SynbQ8BI41 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
SynbQ8BI41 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SynbQ8BI41 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SynbQ8BI41 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.73■□□□□ 0.11
SynbQ8BI41 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SynbQ8BI41 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SynbQ8BI41 Gm24589-201ENSMUST00000116692 94 ntBASIC15.73■□□□□ 0.11
SynbQ8BI41 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.73■□□□□ 0.11
SynbQ8BI41 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.73■□□□□ 0.11
SynbQ8BI41 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SynbQ8BI41 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SynbQ8BI41 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SynbQ8BI41 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SynbQ8BI41 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
SynbQ8BI41 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.73■□□□□ 0.11
SynbQ8BI41 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SynbQ8BI41 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SynbQ8BI41 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SynbQ8BI41 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SynbQ8BI41 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SynbQ8BI41 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SynbQ8BI41 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SynbQ8BI41 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SynbQ8BI41 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SynbQ8BI41 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.72■□□□□ 0.11
SynbQ8BI41 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.72■□□□□ 0.11
SynbQ8BI41 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SynbQ8BI41 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SynbQ8BI41 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SynbQ8BI41 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SynbQ8BI41 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
SynbQ8BI41 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SynbQ8BI41 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SynbQ8BI41 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SynbQ8BI41 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SynbQ8BI41 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SynbQ8BI41 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SynbQ8BI41 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SynbQ8BI41 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SynbQ8BI41 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.71■□□□□ 0.11
SynbQ8BI41 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SynbQ8BI41 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SynbQ8BI41 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SynbQ8BI41 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SynbQ8BI41 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
SynbQ8BI41 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SynbQ8BI41 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SynbQ8BI41 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SynbQ8BI41 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SynbQ8BI41 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.7■□□□□ 0.1
SynbQ8BI41 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SynbQ8BI41 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SynbQ8BI41 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SynbQ8BI41 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.7■□□□□ 0.1
SynbQ8BI41 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SynbQ8BI41 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SynbQ8BI41 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SynbQ8BI41 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SynbQ8BI41 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.7■□□□□ 0.1
SynbQ8BI41 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.7■□□□□ 0.1
SynbQ8BI41 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SynbQ8BI41 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
SynbQ8BI41 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SynbQ8BI41 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SynbQ8BI41 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SynbQ8BI41 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SynbQ8BI41 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SynbQ8BI41 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SynbQ8BI41 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SynbQ8BI41 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SynbQ8BI41 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SynbQ8BI41 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SynbQ8BI41 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SynbQ8BI41 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SynbQ8BI41 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SynbQ8BI41 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SynbQ8BI41 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SynbQ8BI41 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SynbQ8BI41 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SynbQ8BI41 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SynbQ8BI41 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SynbQ8BI41 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.69■□□□□ 0.1
SynbQ8BI41 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SynbQ8BI41 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms