Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Samm50Q8BGH2 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Samm50Q8BGH2 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Samm50Q8BGH2 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Samm50Q8BGH2 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Samm50Q8BGH2 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Samm50Q8BGH2 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC19.37■□□□□ 0.69
Samm50Q8BGH2 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Samm50Q8BGH2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Samm50Q8BGH2 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Samm50Q8BGH2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Samm50Q8BGH2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Samm50Q8BGH2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Samm50Q8BGH2 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Samm50Q8BGH2 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Samm50Q8BGH2 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Samm50Q8BGH2 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Samm50Q8BGH2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Samm50Q8BGH2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Samm50Q8BGH2 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Samm50Q8BGH2 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Samm50Q8BGH2 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Samm50Q8BGH2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Samm50Q8BGH2 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Samm50Q8BGH2 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Samm50Q8BGH2 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Samm50Q8BGH2 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Samm50Q8BGH2 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.36■□□□□ 0.69
Samm50Q8BGH2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Samm50Q8BGH2 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Samm50Q8BGH2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.36■□□□□ 0.69
Samm50Q8BGH2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Samm50Q8BGH2 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Samm50Q8BGH2 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Samm50Q8BGH2 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Samm50Q8BGH2 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.36■□□□□ 0.69
Samm50Q8BGH2 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Samm50Q8BGH2 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Samm50Q8BGH2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Samm50Q8BGH2 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Samm50Q8BGH2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Samm50Q8BGH2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Samm50Q8BGH2 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Samm50Q8BGH2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Samm50Q8BGH2 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Samm50Q8BGH2 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Samm50Q8BGH2 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Samm50Q8BGH2 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Samm50Q8BGH2 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Samm50Q8BGH2 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Samm50Q8BGH2 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Samm50Q8BGH2 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.35■□□□□ 0.69
Samm50Q8BGH2 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Samm50Q8BGH2 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Samm50Q8BGH2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Samm50Q8BGH2 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Samm50Q8BGH2 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Samm50Q8BGH2 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Samm50Q8BGH2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Samm50Q8BGH2 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Samm50Q8BGH2 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Samm50Q8BGH2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Samm50Q8BGH2 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Samm50Q8BGH2 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Samm50Q8BGH2 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Samm50Q8BGH2 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Samm50Q8BGH2 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Samm50Q8BGH2 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Samm50Q8BGH2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Samm50Q8BGH2 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Samm50Q8BGH2 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Samm50Q8BGH2 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Samm50Q8BGH2 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Samm50Q8BGH2 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.33■□□□□ 0.69
Samm50Q8BGH2 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Samm50Q8BGH2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.33■□□□□ 0.69
Samm50Q8BGH2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Samm50Q8BGH2 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.33■□□□□ 0.69
Samm50Q8BGH2 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.33■□□□□ 0.69
Samm50Q8BGH2 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Samm50Q8BGH2 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Samm50Q8BGH2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.33■□□□□ 0.68
Samm50Q8BGH2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Samm50Q8BGH2 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.33■□□□□ 0.68
Samm50Q8BGH2 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Samm50Q8BGH2 Mir5130-201ENSMUST00000175160 84 ntBASIC19.33■□□□□ 0.68
Samm50Q8BGH2 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.33■□□□□ 0.68
Samm50Q8BGH2 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.33■□□□□ 0.68
Samm50Q8BGH2 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Samm50Q8BGH2 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Samm50Q8BGH2 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Samm50Q8BGH2 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Samm50Q8BGH2 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Samm50Q8BGH2 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Samm50Q8BGH2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Samm50Q8BGH2 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Samm50Q8BGH2 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Samm50Q8BGH2 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Samm50Q8BGH2 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Samm50Q8BGH2 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms