Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim65Q8BFW4 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim65Q8BFW4 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim65Q8BFW4 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim65Q8BFW4 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim65Q8BFW4 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.7■□□□□ 0.42
Trim65Q8BFW4 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim65Q8BFW4 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim65Q8BFW4 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim65Q8BFW4 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim65Q8BFW4 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim65Q8BFW4 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim65Q8BFW4 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim65Q8BFW4 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim65Q8BFW4 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim65Q8BFW4 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim65Q8BFW4 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim65Q8BFW4 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim65Q8BFW4 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim65Q8BFW4 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
Trim65Q8BFW4 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim65Q8BFW4 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim65Q8BFW4 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim65Q8BFW4 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim65Q8BFW4 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim65Q8BFW4 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim65Q8BFW4 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
Trim65Q8BFW4 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim65Q8BFW4 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.69■□□□□ 0.42
Trim65Q8BFW4 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trim65Q8BFW4 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.69■□□□□ 0.42
Trim65Q8BFW4 Gm13836-201ENSMUST00000121159 501 ntBASIC17.69■□□□□ 0.42
Trim65Q8BFW4 Gm27389-201ENSMUST00000183622 195 ntBASIC17.69■□□□□ 0.42
Trim65Q8BFW4 Gm18421-201ENSMUST00000204122 625 ntBASIC17.69■□□□□ 0.42
Trim65Q8BFW4 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim65Q8BFW4 Gm21559-201ENSMUST00000220638 855 ntBASIC17.69■□□□□ 0.42
Trim65Q8BFW4 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim65Q8BFW4 Gm8587-201ENSMUST00000076538 843 ntBASIC17.69■□□□□ 0.42
Trim65Q8BFW4 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim65Q8BFW4 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim65Q8BFW4 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.69■□□□□ 0.42
Trim65Q8BFW4 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim65Q8BFW4 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trim65Q8BFW4 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim65Q8BFW4 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trim65Q8BFW4 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.69■□□□□ 0.42
Trim65Q8BFW4 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim65Q8BFW4 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim65Q8BFW4 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim65Q8BFW4 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim65Q8BFW4 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim65Q8BFW4 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim65Q8BFW4 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim65Q8BFW4 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim65Q8BFW4 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim65Q8BFW4 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim65Q8BFW4 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Trim65Q8BFW4 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Trim65Q8BFW4 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim65Q8BFW4 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim65Q8BFW4 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim65Q8BFW4 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim65Q8BFW4 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim65Q8BFW4 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim65Q8BFW4 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.68■□□□□ 0.42
Trim65Q8BFW4 Gm18032-201ENSMUST00000222541 538 ntBASIC17.68■□□□□ 0.42
Trim65Q8BFW4 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.68■□□□□ 0.42
Trim65Q8BFW4 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim65Q8BFW4 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim65Q8BFW4 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim65Q8BFW4 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim65Q8BFW4 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim65Q8BFW4 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim65Q8BFW4 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Trim65Q8BFW4 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim65Q8BFW4 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim65Q8BFW4 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim65Q8BFW4 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim65Q8BFW4 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.67■□□□□ 0.42
Trim65Q8BFW4 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim65Q8BFW4 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim65Q8BFW4 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim65Q8BFW4 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trim65Q8BFW4 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim65Q8BFW4 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim65Q8BFW4 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim65Q8BFW4 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim65Q8BFW4 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim65Q8BFW4 Gm10231-201ENSMUST00000181584 441 ntBASIC17.67■□□□□ 0.42
Trim65Q8BFW4 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim65Q8BFW4 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.67■□□□□ 0.42
Trim65Q8BFW4 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim65Q8BFW4 Gm10175-202ENSMUST00000208752 441 ntBASIC17.67■□□□□ 0.42
Trim65Q8BFW4 Gm18101-201ENSMUST00000215769 548 ntBASIC17.67■□□□□ 0.42
Trim65Q8BFW4 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.67■□□□□ 0.42
Trim65Q8BFW4 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim65Q8BFW4 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim65Q8BFW4 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.67■□□□□ 0.42
Trim65Q8BFW4 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim65Q8BFW4 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms