Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vrk1Q80X41 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vrk1Q80X41 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vrk1Q80X41 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vrk1Q80X41 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vrk1Q80X41 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.71■□□□□ 0.11
Vrk1Q80X41 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vrk1Q80X41 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vrk1Q80X41 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.71■□□□□ 0.11
Vrk1Q80X41 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.71■□□□□ 0.11
Vrk1Q80X41 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.71■□□□□ 0.11
Vrk1Q80X41 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vrk1Q80X41 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.71■□□□□ 0.11
Vrk1Q80X41 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vrk1Q80X41 Gm18195-201ENSMUST00000207604 706 ntBASIC15.71■□□□□ 0.11
Vrk1Q80X41 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vrk1Q80X41 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Vrk1Q80X41 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vrk1Q80X41 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Vrk1Q80X41 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vrk1Q80X41 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vrk1Q80X41 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vrk1Q80X41 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vrk1Q80X41 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Vrk1Q80X41 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Vrk1Q80X41 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vrk1Q80X41 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.7■□□□□ 0.1
Vrk1Q80X41 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.7■□□□□ 0.1
Vrk1Q80X41 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vrk1Q80X41 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vrk1Q80X41 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vrk1Q80X41 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vrk1Q80X41 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vrk1Q80X41 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vrk1Q80X41 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vrk1Q80X41 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vrk1Q80X41 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vrk1Q80X41 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vrk1Q80X41 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vrk1Q80X41 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vrk1Q80X41 Gm18733-201ENSMUST00000173950 856 ntBASIC15.7■□□□□ 0.1
Vrk1Q80X41 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vrk1Q80X41 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.7■□□□□ 0.1
Vrk1Q80X41 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.7■□□□□ 0.1
Vrk1Q80X41 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Vrk1Q80X41 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.7■□□□□ 0.1
Vrk1Q80X41 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.7■□□□□ 0.1
Vrk1Q80X41 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
Vrk1Q80X41 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vrk1Q80X41 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vrk1Q80X41 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vrk1Q80X41 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vrk1Q80X41 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vrk1Q80X41 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.7■□□□□ 0.1
Vrk1Q80X41 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vrk1Q80X41 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vrk1Q80X41 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Vrk1Q80X41 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vrk1Q80X41 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vrk1Q80X41 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vrk1Q80X41 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vrk1Q80X41 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Vrk1Q80X41 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.69■□□□□ 0.1
Vrk1Q80X41 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vrk1Q80X41 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Vrk1Q80X41 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Vrk1Q80X41 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.69■□□□□ 0.1
Vrk1Q80X41 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Vrk1Q80X41 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.69■□□□□ 0.1
Vrk1Q80X41 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vrk1Q80X41 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.69■□□□□ 0.1
Vrk1Q80X41 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vrk1Q80X41 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vrk1Q80X41 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.69■□□□□ 0.1
Vrk1Q80X41 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.69■□□□□ 0.1
Vrk1Q80X41 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vrk1Q80X41 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vrk1Q80X41 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vrk1Q80X41 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vrk1Q80X41 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vrk1Q80X41 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Vrk1Q80X41 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vrk1Q80X41 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vrk1Q80X41 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Vrk1Q80X41 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vrk1Q80X41 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.68■□□□□ 0.1
Vrk1Q80X41 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Vrk1Q80X41 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vrk1Q80X41 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Vrk1Q80X41 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vrk1Q80X41 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vrk1Q80X41 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vrk1Q80X41 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vrk1Q80X41 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vrk1Q80X41 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vrk1Q80X41 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vrk1Q80X41 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vrk1Q80X41 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vrk1Q80X41 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.68■□□□□ 0.1
Vrk1Q80X41 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms