Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Srrm3Q80WV7 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Srrm3Q80WV7 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Srrm3Q80WV7 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.22■□□□□ 0.35
Srrm3Q80WV7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.22■□□□□ 0.35
Srrm3Q80WV7 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.22■□□□□ 0.35
Srrm3Q80WV7 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Srrm3Q80WV7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Srrm3Q80WV7 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Srrm3Q80WV7 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Srrm3Q80WV7 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Srrm3Q80WV7 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Srrm3Q80WV7 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Srrm3Q80WV7 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Srrm3Q80WV7 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Srrm3Q80WV7 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Srrm3Q80WV7 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.22■□□□□ 0.35
Srrm3Q80WV7 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
Srrm3Q80WV7 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Srrm3Q80WV7 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Srrm3Q80WV7 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Srrm3Q80WV7 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Srrm3Q80WV7 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Srrm3Q80WV7 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.21■□□□□ 0.35
Srrm3Q80WV7 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Srrm3Q80WV7 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Srrm3Q80WV7 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Srrm3Q80WV7 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Srrm3Q80WV7 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Srrm3Q80WV7 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Srrm3Q80WV7 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Srrm3Q80WV7 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Srrm3Q80WV7 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Srrm3Q80WV7 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Srrm3Q80WV7 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Srrm3Q80WV7 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Srrm3Q80WV7 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Srrm3Q80WV7 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Srrm3Q80WV7 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Srrm3Q80WV7 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Srrm3Q80WV7 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Srrm3Q80WV7 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.21■□□□□ 0.34
Srrm3Q80WV7 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.21■□□□□ 0.34
Srrm3Q80WV7 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Srrm3Q80WV7 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Srrm3Q80WV7 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Srrm3Q80WV7 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Srrm3Q80WV7 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.2■□□□□ 0.34
Srrm3Q80WV7 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Srrm3Q80WV7 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Srrm3Q80WV7 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Srrm3Q80WV7 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Srrm3Q80WV7 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Srrm3Q80WV7 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Srrm3Q80WV7 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Srrm3Q80WV7 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Srrm3Q80WV7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.2■□□□□ 0.34
Srrm3Q80WV7 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Srrm3Q80WV7 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.2■□□□□ 0.34
Srrm3Q80WV7 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Srrm3Q80WV7 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.2■□□□□ 0.34
Srrm3Q80WV7 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Srrm3Q80WV7 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Srrm3Q80WV7 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Srrm3Q80WV7 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Srrm3Q80WV7 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Srrm3Q80WV7 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.2■□□□□ 0.34
Srrm3Q80WV7 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Srrm3Q80WV7 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Srrm3Q80WV7 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Srrm3Q80WV7 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.2■□□□□ 0.34
Srrm3Q80WV7 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Srrm3Q80WV7 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Srrm3Q80WV7 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Srrm3Q80WV7 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Srrm3Q80WV7 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Srrm3Q80WV7 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Srrm3Q80WV7 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Srrm3Q80WV7 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Srrm3Q80WV7 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Srrm3Q80WV7 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Srrm3Q80WV7 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Srrm3Q80WV7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Srrm3Q80WV7 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Srrm3Q80WV7 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Srrm3Q80WV7 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Srrm3Q80WV7 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Srrm3Q80WV7 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Srrm3Q80WV7 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Srrm3Q80WV7 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Srrm3Q80WV7 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Srrm3Q80WV7 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Srrm3Q80WV7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Srrm3Q80WV7 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Srrm3Q80WV7 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Srrm3Q80WV7 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Srrm3Q80WV7 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Srrm3Q80WV7 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Srrm3Q80WV7 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Srrm3Q80WV7 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms