Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Exosc3Q7TQK4 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.18■□□□□ 0.02
Exosc3Q7TQK4 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Exosc3Q7TQK4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Exosc3Q7TQK4 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Exosc3Q7TQK4 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Exosc3Q7TQK4 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Exosc3Q7TQK4 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Exosc3Q7TQK4 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Exosc3Q7TQK4 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Exosc3Q7TQK4 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Exosc3Q7TQK4 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Exosc3Q7TQK4 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Exosc3Q7TQK4 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Exosc3Q7TQK4 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Exosc3Q7TQK4 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.17■□□□□ 0.02
Exosc3Q7TQK4 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Exosc3Q7TQK4 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Exosc3Q7TQK4 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.17■□□□□ 0.02
Exosc3Q7TQK4 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Exosc3Q7TQK4 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Exosc3Q7TQK4 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Exosc3Q7TQK4 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Exosc3Q7TQK4 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Exosc3Q7TQK4 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Exosc3Q7TQK4 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
Exosc3Q7TQK4 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Exosc3Q7TQK4 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Exosc3Q7TQK4 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Exosc3Q7TQK4 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Exosc3Q7TQK4 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Exosc3Q7TQK4 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Exosc3Q7TQK4 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Exosc3Q7TQK4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Exosc3Q7TQK4 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Exosc3Q7TQK4 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Exosc3Q7TQK4 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Exosc3Q7TQK4 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Exosc3Q7TQK4 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Exosc3Q7TQK4 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Exosc3Q7TQK4 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.17■□□□□ 0.02
Exosc3Q7TQK4 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Exosc3Q7TQK4 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Exosc3Q7TQK4 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Exosc3Q7TQK4 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.16■□□□□ 0.02
Exosc3Q7TQK4 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Exosc3Q7TQK4 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Exosc3Q7TQK4 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Exosc3Q7TQK4 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Exosc3Q7TQK4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.16■□□□□ 0.02
Exosc3Q7TQK4 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Exosc3Q7TQK4 Gm7977-201ENSMUST00000193787 748 ntBASIC15.16■□□□□ 0.02
Exosc3Q7TQK4 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Exosc3Q7TQK4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Exosc3Q7TQK4 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Exosc3Q7TQK4 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Exosc3Q7TQK4 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Exosc3Q7TQK4 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Exosc3Q7TQK4 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Exosc3Q7TQK4 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Exosc3Q7TQK4 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Exosc3Q7TQK4 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.15■□□□□ 0.02
Exosc3Q7TQK4 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Exosc3Q7TQK4 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Exosc3Q7TQK4 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Exosc3Q7TQK4 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.15■□□□□ 0.02
Exosc3Q7TQK4 Gm6623-201ENSMUST00000173570 544 ntBASIC15.15■□□□□ 0.02
Exosc3Q7TQK4 Gm6345-202ENSMUST00000180900 204 ntBASIC15.15■□□□□ 0.02
Exosc3Q7TQK4 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Exosc3Q7TQK4 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Exosc3Q7TQK4 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Exosc3Q7TQK4 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Exosc3Q7TQK4 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.15■□□□□ 0.02
Exosc3Q7TQK4 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Exosc3Q7TQK4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Exosc3Q7TQK4 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Exosc3Q7TQK4 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Exosc3Q7TQK4 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Exosc3Q7TQK4 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.15■□□□□ 0.02
Exosc3Q7TQK4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Exosc3Q7TQK4 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Exosc3Q7TQK4 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Exosc3Q7TQK4 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Exosc3Q7TQK4 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Exosc3Q7TQK4 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Exosc3Q7TQK4 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Exosc3Q7TQK4 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Exosc3Q7TQK4 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Exosc3Q7TQK4 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.14■□□□□ 0.01
Exosc3Q7TQK4 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Exosc3Q7TQK4 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Exosc3Q7TQK4 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Exosc3Q7TQK4 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.14■□□□□ 0.01
Exosc3Q7TQK4 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Exosc3Q7TQK4 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Exosc3Q7TQK4 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Exosc3Q7TQK4 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Exosc3Q7TQK4 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.14■□□□□ 0.01
Exosc3Q7TQK4 Gm11950-201ENSMUST00000121615 838 ntBASIC15.14■□□□□ 0.01
Exosc3Q7TQK4 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms