Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.08■□□□□ 0.32
Cspg5Q71M36 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cspg5Q71M36 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cspg5Q71M36 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cspg5Q71M36 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cspg5Q71M36 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
Cspg5Q71M36 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cspg5Q71M36 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.08■□□□□ 0.32
Cspg5Q71M36 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cspg5Q71M36 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Cspg5Q71M36 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cspg5Q71M36 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cspg5Q71M36 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cspg5Q71M36 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cspg5Q71M36 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cspg5Q71M36 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cspg5Q71M36 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cspg5Q71M36 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cspg5Q71M36 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cspg5Q71M36 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cspg5Q71M36 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cspg5Q71M36 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cspg5Q71M36 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cspg5Q71M36 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Cspg5Q71M36 Gm10052-201ENSMUST00000168019 960 ntBASIC17.07■□□□□ 0.32
Cspg5Q71M36 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.07■□□□□ 0.32
Cspg5Q71M36 Gm7729-201ENSMUST00000050143 801 ntBASIC17.07■□□□□ 0.32
Cspg5Q71M36 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cspg5Q71M36 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cspg5Q71M36 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cspg5Q71M36 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cspg5Q71M36 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cspg5Q71M36 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cspg5Q71M36 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cspg5Q71M36 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cspg5Q71M36 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cspg5Q71M36 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cspg5Q71M36 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cspg5Q71M36 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cspg5Q71M36 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Cspg5Q71M36 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cspg5Q71M36 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.06■□□□□ 0.32
Cspg5Q71M36 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Cspg5Q71M36 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cspg5Q71M36 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cspg5Q71M36 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cspg5Q71M36 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cspg5Q71M36 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.06■□□□□ 0.32
Cspg5Q71M36 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Cspg5Q71M36 Gm27459-201ENSMUST00000184860 107 ntBASIC17.06■□□□□ 0.32
Cspg5Q71M36 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cspg5Q71M36 Birc2-201ENSMUST00000054878 378 ntBASIC17.06■□□□□ 0.32
Cspg5Q71M36 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cspg5Q71M36 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cspg5Q71M36 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.06■□□□□ 0.32
Cspg5Q71M36 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.06■□□□□ 0.32
Cspg5Q71M36 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cspg5Q71M36 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cspg5Q71M36 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cspg5Q71M36 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cspg5Q71M36 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cspg5Q71M36 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cspg5Q71M36 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.05■□□□□ 0.32
Cspg5Q71M36 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cspg5Q71M36 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.05■□□□□ 0.32
Cspg5Q71M36 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cspg5Q71M36 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cspg5Q71M36 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cspg5Q71M36 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.05■□□□□ 0.32
Cspg5Q71M36 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cspg5Q71M36 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.05■□□□□ 0.32
Cspg5Q71M36 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Cspg5Q71M36 Idnk-204ENSMUST00000226010 1898 ntBASIC17.05■□□□□ 0.32
Cspg5Q71M36 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cspg5Q71M36 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cspg5Q71M36 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.05■□□□□ 0.32
Cspg5Q71M36 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.05■□□□□ 0.32
Cspg5Q71M36 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cspg5Q71M36 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cspg5Q71M36 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cspg5Q71M36 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cspg5Q71M36 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.04■□□□□ 0.32
Cspg5Q71M36 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cspg5Q71M36 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cspg5Q71M36 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cspg5Q71M36 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Cspg5Q71M36 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cspg5Q71M36 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cspg5Q71M36 Gm15794-201ENSMUST00000120182 631 ntBASIC17.04■□□□□ 0.32
Cspg5Q71M36 Gm12895-201ENSMUST00000122214 226 ntBASIC17.04■□□□□ 0.32
Cspg5Q71M36 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cspg5Q71M36 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.04■□□□□ 0.32
Cspg5Q71M36 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cspg5Q71M36 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.04■□□□□ 0.32
Cspg5Q71M36 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Cspg5Q71M36 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cspg5Q71M36 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Cspg5Q71M36 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.04■□□□□ 0.32
Cspg5Q71M36 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cspg5Q71M36 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms