Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Npc1l1Q6T3U4 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Npc1l1Q6T3U4 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Npc1l1Q6T3U4 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Npc1l1Q6T3U4 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Npc1l1Q6T3U4 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Npc1l1Q6T3U4 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.72■□□□□ 0.75
Npc1l1Q6T3U4 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Npc1l1Q6T3U4 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Npc1l1Q6T3U4 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Npc1l1Q6T3U4 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Npc1l1Q6T3U4 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Npc1l1Q6T3U4 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Npc1l1Q6T3U4 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Npc1l1Q6T3U4 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Npc1l1Q6T3U4 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Npc1l1Q6T3U4 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Npc1l1Q6T3U4 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Npc1l1Q6T3U4 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Npc1l1Q6T3U4 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Npc1l1Q6T3U4 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Npc1l1Q6T3U4 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.71■□□□□ 0.75
Npc1l1Q6T3U4 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Npc1l1Q6T3U4 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
Npc1l1Q6T3U4 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
Npc1l1Q6T3U4 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Npc1l1Q6T3U4 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Npc1l1Q6T3U4 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Npc1l1Q6T3U4 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Npc1l1Q6T3U4 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Npc1l1Q6T3U4 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Npc1l1Q6T3U4 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Npc1l1Q6T3U4 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Npc1l1Q6T3U4 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.74
Npc1l1Q6T3U4 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Npc1l1Q6T3U4 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Npc1l1Q6T3U4 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Npc1l1Q6T3U4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Npc1l1Q6T3U4 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Npc1l1Q6T3U4 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Npc1l1Q6T3U4 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Npc1l1Q6T3U4 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Npc1l1Q6T3U4 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC19.7■□□□□ 0.74
Npc1l1Q6T3U4 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Npc1l1Q6T3U4 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.7■□□□□ 0.74
Npc1l1Q6T3U4 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Npc1l1Q6T3U4 Gm36967-201ENSMUST00000193814 266 ntBASIC19.7■□□□□ 0.74
Npc1l1Q6T3U4 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC19.7■□□□□ 0.74
Npc1l1Q6T3U4 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Npc1l1Q6T3U4 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Npc1l1Q6T3U4 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.7■□□□□ 0.74
Npc1l1Q6T3U4 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Npc1l1Q6T3U4 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Npc1l1Q6T3U4 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Npc1l1Q6T3U4 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Npc1l1Q6T3U4 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Npc1l1Q6T3U4 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Npc1l1Q6T3U4 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Npc1l1Q6T3U4 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Npc1l1Q6T3U4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.69■□□□□ 0.74
Npc1l1Q6T3U4 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Npc1l1Q6T3U4 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Npc1l1Q6T3U4 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Npc1l1Q6T3U4 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Npc1l1Q6T3U4 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Npc1l1Q6T3U4 Rprl3-201ENSMUST00000157400 290 ntBASIC19.69■□□□□ 0.74
Npc1l1Q6T3U4 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Npc1l1Q6T3U4 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Npc1l1Q6T3U4 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.69■□□□□ 0.74
Npc1l1Q6T3U4 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Npc1l1Q6T3U4 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Npc1l1Q6T3U4 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC19.69■□□□□ 0.74
Npc1l1Q6T3U4 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Npc1l1Q6T3U4 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Npc1l1Q6T3U4 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Npc1l1Q6T3U4 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Npc1l1Q6T3U4 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Npc1l1Q6T3U4 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Npc1l1Q6T3U4 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Npc1l1Q6T3U4 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Npc1l1Q6T3U4 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Npc1l1Q6T3U4 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Npc1l1Q6T3U4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Npc1l1Q6T3U4 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Npc1l1Q6T3U4 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Npc1l1Q6T3U4 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Npc1l1Q6T3U4 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Npc1l1Q6T3U4 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Npc1l1Q6T3U4 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Npc1l1Q6T3U4 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Npc1l1Q6T3U4 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.68■□□□□ 0.74
Npc1l1Q6T3U4 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.68■□□□□ 0.74
Npc1l1Q6T3U4 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Npc1l1Q6T3U4 AC159301.1-201ENSMUST00000225130 1182 ntBASIC19.68■□□□□ 0.74
Npc1l1Q6T3U4 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Npc1l1Q6T3U4 Gm5867-201ENSMUST00000063197 592 ntBASIC19.68■□□□□ 0.74
Npc1l1Q6T3U4 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Npc1l1Q6T3U4 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Npc1l1Q6T3U4 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Npc1l1Q6T3U4 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms