Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Scaf4Q6PFF0 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scaf4Q6PFF0 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scaf4Q6PFF0 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.31■□□□□ 0.2
Scaf4Q6PFF0 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Scaf4Q6PFF0 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scaf4Q6PFF0 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scaf4Q6PFF0 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scaf4Q6PFF0 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.31■□□□□ 0.2
Scaf4Q6PFF0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Scaf4Q6PFF0 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scaf4Q6PFF0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scaf4Q6PFF0 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Scaf4Q6PFF0 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.31■□□□□ 0.2
Scaf4Q6PFF0 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Scaf4Q6PFF0 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
Scaf4Q6PFF0 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.31■□□□□ 0.2
Scaf4Q6PFF0 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Scaf4Q6PFF0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scaf4Q6PFF0 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.31■□□□□ 0.2
Scaf4Q6PFF0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scaf4Q6PFF0 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scaf4Q6PFF0 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scaf4Q6PFF0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scaf4Q6PFF0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scaf4Q6PFF0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scaf4Q6PFF0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf4Q6PFF0 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf4Q6PFF0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf4Q6PFF0 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf4Q6PFF0 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Scaf4Q6PFF0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf4Q6PFF0 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf4Q6PFF0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf4Q6PFF0 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.3■□□□□ 0.2
Scaf4Q6PFF0 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.3■□□□□ 0.2
Scaf4Q6PFF0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.3■□□□□ 0.2
Scaf4Q6PFF0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.3■□□□□ 0.2
Scaf4Q6PFF0 Gm20049-201ENSMUST00000219950 730 ntBASIC16.3■□□□□ 0.2
Scaf4Q6PFF0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf4Q6PFF0 Gm10602-201ENSMUST00000098239 609 ntBASIC16.3■□□□□ 0.2
Scaf4Q6PFF0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf4Q6PFF0 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.3■□□□□ 0.2
Scaf4Q6PFF0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf4Q6PFF0 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf4Q6PFF0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf4Q6PFF0 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf4Q6PFF0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.3■□□□□ 0.2
Scaf4Q6PFF0 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf4Q6PFF0 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Scaf4Q6PFF0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf4Q6PFF0 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf4Q6PFF0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf4Q6PFF0 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scaf4Q6PFF0 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scaf4Q6PFF0 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scaf4Q6PFF0 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scaf4Q6PFF0 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Scaf4Q6PFF0 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.29■□□□□ 0.2
Scaf4Q6PFF0 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scaf4Q6PFF0 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scaf4Q6PFF0 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scaf4Q6PFF0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scaf4Q6PFF0 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.29■□□□□ 0.2
Scaf4Q6PFF0 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scaf4Q6PFF0 Gm7638-201ENSMUST00000121348 967 ntBASIC16.29■□□□□ 0.2
Scaf4Q6PFF0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scaf4Q6PFF0 Il3ra-202ENSMUST00000223589 738 ntBASIC16.29■□□□□ 0.2
Scaf4Q6PFF0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scaf4Q6PFF0 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scaf4Q6PFF0 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scaf4Q6PFF0 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scaf4Q6PFF0 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scaf4Q6PFF0 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scaf4Q6PFF0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scaf4Q6PFF0 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scaf4Q6PFF0 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scaf4Q6PFF0 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scaf4Q6PFF0 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scaf4Q6PFF0 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scaf4Q6PFF0 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Scaf4Q6PFF0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scaf4Q6PFF0 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scaf4Q6PFF0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scaf4Q6PFF0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Scaf4Q6PFF0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scaf4Q6PFF0 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scaf4Q6PFF0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scaf4Q6PFF0 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scaf4Q6PFF0 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scaf4Q6PFF0 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scaf4Q6PFF0 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scaf4Q6PFF0 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scaf4Q6PFF0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scaf4Q6PFF0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Scaf4Q6PFF0 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scaf4Q6PFF0 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scaf4Q6PFF0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.28■□□□□ 0.2
Scaf4Q6PFF0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.28■□□□□ 0.2
Scaf4Q6PFF0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms