Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.5□□□□□ -0.09
Snrnp40Q6PE01 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Snrnp40Q6PE01 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.5□□□□□ -0.09
Snrnp40Q6PE01 Gm24513-201ENSMUST00000174964 138 ntBASIC14.5□□□□□ -0.09
Snrnp40Q6PE01 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Snrnp40Q6PE01 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Snrnp40Q6PE01 Gm27397-201ENSMUST00000184997 107 ntBASIC14.5□□□□□ -0.09
Snrnp40Q6PE01 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Snrnp40Q6PE01 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.5□□□□□ -0.09
Snrnp40Q6PE01 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Snrnp40Q6PE01 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Snrnp40Q6PE01 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Snrnp40Q6PE01 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Snrnp40Q6PE01 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Snrnp40Q6PE01 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Snrnp40Q6PE01 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Snrnp40Q6PE01 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Snrnp40Q6PE01 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Snrnp40Q6PE01 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Snrnp40Q6PE01 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Snrnp40Q6PE01 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Snrnp40Q6PE01 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Snrnp40Q6PE01 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Snrnp40Q6PE01 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Snrnp40Q6PE01 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Snrnp40Q6PE01 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Snrnp40Q6PE01 Gm8097-201ENSMUST00000117903 829 ntBASIC14.49□□□□□ -0.09
Snrnp40Q6PE01 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.49□□□□□ -0.09
Snrnp40Q6PE01 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Snrnp40Q6PE01 Gm9727-201ENSMUST00000161387 555 ntBASIC14.49□□□□□ -0.09
Snrnp40Q6PE01 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Snrnp40Q6PE01 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Snrnp40Q6PE01 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.49□□□□□ -0.09
Snrnp40Q6PE01 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.49□□□□□ -0.09
Snrnp40Q6PE01 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Snrnp40Q6PE01 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.49□□□□□ -0.09
Snrnp40Q6PE01 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.49□□□□□ -0.09
Snrnp40Q6PE01 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Snrnp40Q6PE01 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Snrnp40Q6PE01 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Snrnp40Q6PE01 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Snrnp40Q6PE01 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Snrnp40Q6PE01 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Snrnp40Q6PE01 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Snrnp40Q6PE01 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Snrnp40Q6PE01 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Snrnp40Q6PE01 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Snrnp40Q6PE01 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Snrnp40Q6PE01 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Snrnp40Q6PE01 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Snrnp40Q6PE01 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Snrnp40Q6PE01 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Snrnp40Q6PE01 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Snrnp40Q6PE01 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Snrnp40Q6PE01 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Snrnp40Q6PE01 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Snrnp40Q6PE01 Gm4459-201ENSMUST00000118750 468 ntBASIC14.48□□□□□ -0.09
Snrnp40Q6PE01 Gm12497-201ENSMUST00000138778 237 ntBASIC14.48□□□□□ -0.09
Snrnp40Q6PE01 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.48□□□□□ -0.09
Snrnp40Q6PE01 Gm27628-201ENSMUST00000184911 107 ntBASIC14.48□□□□□ -0.09
Snrnp40Q6PE01 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Snrnp40Q6PE01 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Snrnp40Q6PE01 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.48□□□□□ -0.09
Snrnp40Q6PE01 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Snrnp40Q6PE01 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.48□□□□□ -0.09
Snrnp40Q6PE01 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.48□□□□□ -0.09
Snrnp40Q6PE01 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Snrnp40Q6PE01 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Snrnp40Q6PE01 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Snrnp40Q6PE01 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Snrnp40Q6PE01 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Snrnp40Q6PE01 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.47□□□□□ -0.09
Snrnp40Q6PE01 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Snrnp40Q6PE01 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.47□□□□□ -0.09
Snrnp40Q6PE01 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Snrnp40Q6PE01 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Snrnp40Q6PE01 Gm4995-201ENSMUST00000117247 432 ntBASIC14.47□□□□□ -0.09
Snrnp40Q6PE01 Gm13036-201ENSMUST00000117799 748 ntBASIC14.47□□□□□ -0.09
Snrnp40Q6PE01 Gm14822-201ENSMUST00000122247 291 ntBASIC14.47□□□□□ -0.09
Snrnp40Q6PE01 Gm11780-201ENSMUST00000136880 516 ntBASIC14.47□□□□□ -0.09
Snrnp40Q6PE01 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Snrnp40Q6PE01 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.47□□□□□ -0.09
Snrnp40Q6PE01 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Snrnp40Q6PE01 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Snrnp40Q6PE01 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Snrnp40Q6PE01 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Snrnp40Q6PE01 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Snrnp40Q6PE01 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.47□□□□□ -0.09
Snrnp40Q6PE01 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Snrnp40Q6PE01 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Snrnp40Q6PE01 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Snrnp40Q6PE01 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Snrnp40Q6PE01 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.47□□□□□ -0.09
Snrnp40Q6PE01 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Snrnp40Q6PE01 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.47□□□□□ -0.09
Snrnp40Q6PE01 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Snrnp40Q6PE01 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Snrnp40Q6PE01 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Snrnp40Q6PE01 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Snrnp40Q6PE01 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms