Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcc2Q6PDG5 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcc2Q6PDG5 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcc2Q6PDG5 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Smarcc2Q6PDG5 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcc2Q6PDG5 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcc2Q6PDG5 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcc2Q6PDG5 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcc2Q6PDG5 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.25■□□□□ 0.67
Smarcc2Q6PDG5 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcc2Q6PDG5 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcc2Q6PDG5 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcc2Q6PDG5 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcc2Q6PDG5 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcc2Q6PDG5 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.25■□□□□ 0.67
Smarcc2Q6PDG5 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcc2Q6PDG5 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcc2Q6PDG5 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcc2Q6PDG5 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcc2Q6PDG5 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcc2Q6PDG5 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcc2Q6PDG5 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcc2Q6PDG5 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcc2Q6PDG5 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcc2Q6PDG5 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcc2Q6PDG5 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Smarcc2Q6PDG5 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Smarcc2Q6PDG5 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Smarcc2Q6PDG5 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcc2Q6PDG5 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcc2Q6PDG5 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcc2Q6PDG5 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcc2Q6PDG5 Gm26039-201ENSMUST00000158152 144 ntBASIC19.24■□□□□ 0.67
Smarcc2Q6PDG5 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.24■□□□□ 0.67
Smarcc2Q6PDG5 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcc2Q6PDG5 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcc2Q6PDG5 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
Smarcc2Q6PDG5 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcc2Q6PDG5 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcc2Q6PDG5 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcc2Q6PDG5 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcc2Q6PDG5 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcc2Q6PDG5 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcc2Q6PDG5 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Smarcc2Q6PDG5 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcc2Q6PDG5 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcc2Q6PDG5 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Smarcc2Q6PDG5 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcc2Q6PDG5 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcc2Q6PDG5 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcc2Q6PDG5 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.23■□□□□ 0.67
Smarcc2Q6PDG5 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Smarcc2Q6PDG5 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.23■□□□□ 0.67
Smarcc2Q6PDG5 Gm44450-201ENSMUST00000199528 114 ntBASIC19.23■□□□□ 0.67
Smarcc2Q6PDG5 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcc2Q6PDG5 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcc2Q6PDG5 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcc2Q6PDG5 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcc2Q6PDG5 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
Smarcc2Q6PDG5 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcc2Q6PDG5 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcc2Q6PDG5 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcc2Q6PDG5 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.23■□□□□ 0.67
Smarcc2Q6PDG5 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcc2Q6PDG5 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Smarcc2Q6PDG5 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Smarcc2Q6PDG5 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcc2Q6PDG5 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcc2Q6PDG5 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Smarcc2Q6PDG5 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcc2Q6PDG5 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcc2Q6PDG5 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcc2Q6PDG5 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.22■□□□□ 0.67
Smarcc2Q6PDG5 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcc2Q6PDG5 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcc2Q6PDG5 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.22■□□□□ 0.67
Smarcc2Q6PDG5 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcc2Q6PDG5 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcc2Q6PDG5 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcc2Q6PDG5 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Smarcc2Q6PDG5 Gm18115-201ENSMUST00000221209 621 ntBASIC19.22■□□□□ 0.67
Smarcc2Q6PDG5 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcc2Q6PDG5 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcc2Q6PDG5 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcc2Q6PDG5 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcc2Q6PDG5 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcc2Q6PDG5 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcc2Q6PDG5 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcc2Q6PDG5 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcc2Q6PDG5 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcc2Q6PDG5 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcc2Q6PDG5 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcc2Q6PDG5 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcc2Q6PDG5 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcc2Q6PDG5 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Smarcc2Q6PDG5 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Smarcc2Q6PDG5 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcc2Q6PDG5 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcc2Q6PDG5 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcc2Q6PDG5 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms