Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Smarcd3Q6P9Z1 Gm12085-201ENSMUST00000119263 940 ntBASIC15.17■□□□□ 0.02
Smarcd3Q6P9Z1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcd3Q6P9Z1 Gm27000-201ENSMUST00000182943 842 ntBASIC15.17■□□□□ 0.02
Smarcd3Q6P9Z1 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcd3Q6P9Z1 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Smarcd3Q6P9Z1 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcd3Q6P9Z1 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcd3Q6P9Z1 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcd3Q6P9Z1 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcd3Q6P9Z1 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcd3Q6P9Z1 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcd3Q6P9Z1 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Smarcd3Q6P9Z1 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcd3Q6P9Z1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.16■□□□□ 0.02
Smarcd3Q6P9Z1 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcd3Q6P9Z1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Smarcd3Q6P9Z1 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.16■□□□□ 0.02
Smarcd3Q6P9Z1 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Smarcd3Q6P9Z1 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcd3Q6P9Z1 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.16■□□□□ 0.02
Smarcd3Q6P9Z1 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.16■□□□□ 0.02
Smarcd3Q6P9Z1 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcd3Q6P9Z1 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcd3Q6P9Z1 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Smarcd3Q6P9Z1 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcd3Q6P9Z1 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Smarcd3Q6P9Z1 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcd3Q6P9Z1 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd3Q6P9Z1 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd3Q6P9Z1 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Smarcd3Q6P9Z1 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd3Q6P9Z1 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd3Q6P9Z1 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd3Q6P9Z1 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd3Q6P9Z1 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd3Q6P9Z1 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd3Q6P9Z1 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Smarcd3Q6P9Z1 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd3Q6P9Z1 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd3Q6P9Z1 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd3Q6P9Z1 Gm7638-201ENSMUST00000121348 967 ntBASIC15.15■□□□□ 0.02
Smarcd3Q6P9Z1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd3Q6P9Z1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.15■□□□□ 0.02
Smarcd3Q6P9Z1 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd3Q6P9Z1 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd3Q6P9Z1 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd3Q6P9Z1 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd3Q6P9Z1 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.15■□□□□ 0.02
Smarcd3Q6P9Z1 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd3Q6P9Z1 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd3Q6P9Z1 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd3Q6P9Z1 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Smarcd3Q6P9Z1 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd3Q6P9Z1 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd3Q6P9Z1 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd3Q6P9Z1 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd3Q6P9Z1 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd3Q6P9Z1 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd3Q6P9Z1 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd3Q6P9Z1 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd3Q6P9Z1 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd3Q6P9Z1 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd3Q6P9Z1 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.14■□□□□ 0.01
Smarcd3Q6P9Z1 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Smarcd3Q6P9Z1 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd3Q6P9Z1 Gm38027-201ENSMUST00000192315 235 ntBASIC15.14■□□□□ 0.01
Smarcd3Q6P9Z1 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.14■□□□□ 0.01
Smarcd3Q6P9Z1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Smarcd3Q6P9Z1 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd3Q6P9Z1 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd3Q6P9Z1 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Smarcd3Q6P9Z1 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd3Q6P9Z1 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd3Q6P9Z1 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd3Q6P9Z1 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd3Q6P9Z1 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Smarcd3Q6P9Z1 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Smarcd3Q6P9Z1 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd3Q6P9Z1 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd3Q6P9Z1 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.14■□□□□ 0.01
Smarcd3Q6P9Z1 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd3Q6P9Z1 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.14■□□□□ 0.01
Smarcd3Q6P9Z1 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd3Q6P9Z1 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd3Q6P9Z1 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd3Q6P9Z1 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd3Q6P9Z1 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd3Q6P9Z1 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Smarcd3Q6P9Z1 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd3Q6P9Z1 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd3Q6P9Z1 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd3Q6P9Z1 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd3Q6P9Z1 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd3Q6P9Z1 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd3Q6P9Z1 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Smarcd3Q6P9Z1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Smarcd3Q6P9Z1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.13■□□□□ 0.01
Smarcd3Q6P9Z1 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd3Q6P9Z1 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms