Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtl3Q6P1Y1 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Rtl3Q6P1Y1 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.06■□□□□ 0.32
Rtl3Q6P1Y1 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Rtl3Q6P1Y1 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtl3Q6P1Y1 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtl3Q6P1Y1 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Rtl3Q6P1Y1 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtl3Q6P1Y1 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtl3Q6P1Y1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtl3Q6P1Y1 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rtl3Q6P1Y1 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtl3Q6P1Y1 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtl3Q6P1Y1 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtl3Q6P1Y1 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtl3Q6P1Y1 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtl3Q6P1Y1 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.05■□□□□ 0.32
Rtl3Q6P1Y1 Gm11950-201ENSMUST00000121615 838 ntBASIC17.05■□□□□ 0.32
Rtl3Q6P1Y1 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.05■□□□□ 0.32
Rtl3Q6P1Y1 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rtl3Q6P1Y1 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.05■□□□□ 0.32
Rtl3Q6P1Y1 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rtl3Q6P1Y1 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rtl3Q6P1Y1 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rtl3Q6P1Y1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtl3Q6P1Y1 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rtl3Q6P1Y1 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.04■□□□□ 0.32
Rtl3Q6P1Y1 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Rtl3Q6P1Y1 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Rtl3Q6P1Y1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtl3Q6P1Y1 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtl3Q6P1Y1 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtl3Q6P1Y1 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtl3Q6P1Y1 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtl3Q6P1Y1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rtl3Q6P1Y1 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtl3Q6P1Y1 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtl3Q6P1Y1 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.03■□□□□ 0.32
Rtl3Q6P1Y1 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.03■□□□□ 0.32
Rtl3Q6P1Y1 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtl3Q6P1Y1 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtl3Q6P1Y1 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtl3Q6P1Y1 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rtl3Q6P1Y1 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rtl3Q6P1Y1 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.03■□□□□ 0.32
Rtl3Q6P1Y1 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.03■□□□□ 0.32
Rtl3Q6P1Y1 Gm17807-201ENSMUST00000186869 298 ntBASIC17.03■□□□□ 0.32
Rtl3Q6P1Y1 Gm29707-201ENSMUST00000196325 491 ntBASIC17.03■□□□□ 0.32
Rtl3Q6P1Y1 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rtl3Q6P1Y1 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtl3Q6P1Y1 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Rtl3Q6P1Y1 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Rtl3Q6P1Y1 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtl3Q6P1Y1 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtl3Q6P1Y1 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtl3Q6P1Y1 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtl3Q6P1Y1 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Rtl3Q6P1Y1 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rtl3Q6P1Y1 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtl3Q6P1Y1 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.03■□□□□ 0.32
Rtl3Q6P1Y1 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtl3Q6P1Y1 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtl3Q6P1Y1 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtl3Q6P1Y1 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rtl3Q6P1Y1 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rtl3Q6P1Y1 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rtl3Q6P1Y1 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.02■□□□□ 0.32
Rtl3Q6P1Y1 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Rtl3Q6P1Y1 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rtl3Q6P1Y1 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Rtl3Q6P1Y1 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rtl3Q6P1Y1 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rtl3Q6P1Y1 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rtl3Q6P1Y1 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Rtl3Q6P1Y1 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.31
Rtl3Q6P1Y1 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Rtl3Q6P1Y1 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Rtl3Q6P1Y1 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Rtl3Q6P1Y1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Rtl3Q6P1Y1 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rtl3Q6P1Y1 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rtl3Q6P1Y1 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Rtl3Q6P1Y1 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.01■□□□□ 0.31
Rtl3Q6P1Y1 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rtl3Q6P1Y1 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rtl3Q6P1Y1 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Rtl3Q6P1Y1 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rtl3Q6P1Y1 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rtl3Q6P1Y1 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rtl3Q6P1Y1 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rtl3Q6P1Y1 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rtl3Q6P1Y1 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Rtl3Q6P1Y1 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rtl3Q6P1Y1 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rtl3Q6P1Y1 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17■□□□□ 0.31
Rtl3Q6P1Y1 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Rtl3Q6P1Y1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rtl3Q6P1Y1 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rtl3Q6P1Y1 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rtl3Q6P1Y1 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms