Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SspnQ62147 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SspnQ62147 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SspnQ62147 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SspnQ62147 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SspnQ62147 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SspnQ62147 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SspnQ62147 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SspnQ62147 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
SspnQ62147 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SspnQ62147 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SspnQ62147 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SspnQ62147 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SspnQ62147 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
SspnQ62147 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SspnQ62147 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SspnQ62147 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC13.81□□□□□ -0.2
SspnQ62147 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.81□□□□□ -0.2
SspnQ62147 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SspnQ62147 Gm27000-201ENSMUST00000182943 842 ntBASIC13.81□□□□□ -0.2
SspnQ62147 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SspnQ62147 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SspnQ62147 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.81□□□□□ -0.2
SspnQ62147 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SspnQ62147 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SspnQ62147 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SspnQ62147 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
SspnQ62147 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SspnQ62147 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SspnQ62147 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SspnQ62147 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SspnQ62147 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SspnQ62147 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SspnQ62147 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SspnQ62147 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SspnQ62147 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SspnQ62147 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SspnQ62147 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SspnQ62147 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SspnQ62147 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SspnQ62147 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SspnQ62147 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SspnQ62147 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
SspnQ62147 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SspnQ62147 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SspnQ62147 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SspnQ62147 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SspnQ62147 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC13.8□□□□□ -0.2
SspnQ62147 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
SspnQ62147 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SspnQ62147 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.8□□□□□ -0.2
SspnQ62147 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SspnQ62147 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.8□□□□□ -0.2
SspnQ62147 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.8□□□□□ -0.2
SspnQ62147 Gm7791-201ENSMUST00000219066 539 ntBASIC13.8□□□□□ -0.2
SspnQ62147 Il3ra-202ENSMUST00000223589 738 ntBASIC13.8□□□□□ -0.2
SspnQ62147 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.8□□□□□ -0.2
SspnQ62147 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SspnQ62147 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SspnQ62147 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SspnQ62147 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SspnQ62147 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SspnQ62147 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SspnQ62147 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SspnQ62147 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SspnQ62147 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SspnQ62147 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SspnQ62147 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SspnQ62147 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SspnQ62147 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SspnQ62147 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SspnQ62147 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.79□□□□□ -0.2
SspnQ62147 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC13.79□□□□□ -0.2
SspnQ62147 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SspnQ62147 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC13.79□□□□□ -0.2
SspnQ62147 Spcs1-207ENSMUST00000228767 1008 ntBASIC13.79□□□□□ -0.2
SspnQ62147 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SspnQ62147 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SspnQ62147 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
SspnQ62147 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SspnQ62147 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SspnQ62147 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SspnQ62147 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SspnQ62147 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SspnQ62147 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SspnQ62147 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SspnQ62147 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.79□□□□□ -0.2
SspnQ62147 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SspnQ62147 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
SspnQ62147 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SspnQ62147 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SspnQ62147 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SspnQ62147 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SspnQ62147 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SspnQ62147 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SspnQ62147 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SspnQ62147 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
SspnQ62147 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SspnQ62147 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SspnQ62147 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms