Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Gm22619-201ENSMUST00000179516 110 ntBASIC22.29■■□□□ 1.16
Gli3Q61602 Gm25255-201ENSMUST00000179579 110 ntBASIC22.29■■□□□ 1.16
Gli3Q61602 Gm24755-201ENSMUST00000179691 110 ntBASIC22.29■■□□□ 1.16
Gli3Q61602 Gm26506-201ENSMUST00000179692 110 ntBASIC22.29■■□□□ 1.16
Gli3Q61602 Gm25086-201ENSMUST00000179931 110 ntBASIC22.29■■□□□ 1.16
Gli3Q61602 Gm23243-201ENSMUST00000180047 110 ntBASIC22.29■■□□□ 1.16
Gli3Q61602 Gm24659-201ENSMUST00000180212 110 ntBASIC22.29■■□□□ 1.16
Gli3Q61602 Gm24169-201ENSMUST00000180244 110 ntBASIC22.29■■□□□ 1.16
Gli3Q61602 Gm23689-201ENSMUST00000180354 110 ntBASIC22.29■■□□□ 1.16
Gli3Q61602 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Gli3Q61602 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Gli3Q61602 Gm27359-201ENSMUST00000184153 110 ntBASIC22.29■■□□□ 1.16
Gli3Q61602 Gm27785-201ENSMUST00000184268 110 ntBASIC22.29■■□□□ 1.16
Gli3Q61602 Gm27466-201ENSMUST00000184396 110 ntBASIC22.29■■□□□ 1.16
Gli3Q61602 Gm27703-201ENSMUST00000184836 110 ntBASIC22.29■■□□□ 1.16
Gli3Q61602 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC22.29■■□□□ 1.16
Gli3Q61602 AL590614.2-201ENSMUST00000225374 1937 ntBASIC22.29■■□□□ 1.16
Gli3Q61602 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Gli3Q61602 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Gli3Q61602 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Gli3Q61602 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Gli3Q61602 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Gli3Q61602 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Gli3Q61602 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Gli3Q61602 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Gli3Q61602 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Gli3Q61602 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC22.29■■□□□ 1.16
Gli3Q61602 Rprl2-201ENSMUST00000157150 290 ntBASIC22.29■■□□□ 1.16
Gli3Q61602 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Gli3Q61602 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Gli3Q61602 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Gli3Q61602 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Gli3Q61602 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Gli3Q61602 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Gli3Q61602 CT025626.1-201ENSMUST00000223735 1455 ntBASIC22.28■■□□□ 1.16
Gli3Q61602 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Gli3Q61602 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Gli3Q61602 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Gli3Q61602 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Gli3Q61602 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC22.28■■□□□ 1.16
Gli3Q61602 Slc35b2-202ENSMUST00000223987 1766 ntBASIC22.28■■□□□ 1.16
Gli3Q61602 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Gli3Q61602 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC22.28■■□□□ 1.16
Gli3Q61602 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
Gli3Q61602 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Gli3Q61602 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Gli3Q61602 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Gli3Q61602 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Gli3Q61602 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Gli3Q61602 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Gli3Q61602 Gm12151-201ENSMUST00000121374 290 ntBASIC22.27■■□□□ 1.16
Gli3Q61602 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Gli3Q61602 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Gli3Q61602 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Gli3Q61602 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC22.27■■□□□ 1.16
Gli3Q61602 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Gli3Q61602 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Gli3Q61602 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC22.27■■□□□ 1.16
Gli3Q61602 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Gli3Q61602 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Gli3Q61602 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Gli3Q61602 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Gli3Q61602 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC22.26■■□□□ 1.15
Gli3Q61602 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Gli3Q61602 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Gli3Q61602 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC22.26■■□□□ 1.15
Gli3Q61602 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC22.26■■□□□ 1.15
Gli3Q61602 AC127302.2-201ENSMUST00000215212 268 ntBASIC22.26■■□□□ 1.15
Gli3Q61602 Gm18622-201ENSMUST00000219361 595 ntBASIC22.26■■□□□ 1.15
Gli3Q61602 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Gli3Q61602 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC22.26■■□□□ 1.15
Gli3Q61602 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Gli3Q61602 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Gli3Q61602 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Gli3Q61602 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Gli3Q61602 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Gli3Q61602 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Gli3Q61602 Best4-ps-201ENSMUST00000129783 1380 ntBASIC22.26■■□□□ 1.15
Gli3Q61602 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Gli3Q61602 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Gli3Q61602 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Gli3Q61602 Gm6226-201ENSMUST00000117765 1146 ntBASIC22.25■■□□□ 1.15
Gli3Q61602 Gm13223-201ENSMUST00000118609 747 ntBASIC22.25■■□□□ 1.15
Gli3Q61602 Gm7774-201ENSMUST00000200064 533 ntBASIC22.25■■□□□ 1.15
Gli3Q61602 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Gli3Q61602 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Gli3Q61602 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Gli3Q61602 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Gli3Q61602 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC22.25■■□□□ 1.15
Gli3Q61602 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Gli3Q61602 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Gli3Q61602 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Gli3Q61602 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Gli3Q61602 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Gli3Q61602 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Gli3Q61602 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Gli3Q61602 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Gli3Q61602 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Gli3Q61602 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Gli3Q61602 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms