Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps13aQ5H8C4 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps13aQ5H8C4 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.31■□□□□ 0.2
Vps13aQ5H8C4 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.3■□□□□ 0.2
Vps13aQ5H8C4 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.3■□□□□ 0.2
Vps13aQ5H8C4 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.3■□□□□ 0.2
Vps13aQ5H8C4 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Vps13aQ5H8C4 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.3■□□□□ 0.2
Vps13aQ5H8C4 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps13aQ5H8C4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vps13aQ5H8C4 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps13aQ5H8C4 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps13aQ5H8C4 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vps13aQ5H8C4 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.3■□□□□ 0.2
Vps13aQ5H8C4 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.3■□□□□ 0.2
Vps13aQ5H8C4 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Vps13aQ5H8C4 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps13aQ5H8C4 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps13aQ5H8C4 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.3■□□□□ 0.2
Vps13aQ5H8C4 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.3■□□□□ 0.2
Vps13aQ5H8C4 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vps13aQ5H8C4 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vps13aQ5H8C4 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.3■□□□□ 0.2
Vps13aQ5H8C4 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps13aQ5H8C4 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.29■□□□□ 0.2
Vps13aQ5H8C4 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps13aQ5H8C4 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.29■□□□□ 0.2
Vps13aQ5H8C4 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps13aQ5H8C4 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vps13aQ5H8C4 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps13aQ5H8C4 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.29■□□□□ 0.2
Vps13aQ5H8C4 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.29■□□□□ 0.2
Vps13aQ5H8C4 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps13aQ5H8C4 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Vps13aQ5H8C4 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vps13aQ5H8C4 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Vps13aQ5H8C4 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps13aQ5H8C4 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Vps13aQ5H8C4 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps13aQ5H8C4 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps13aQ5H8C4 Gm13597-201ENSMUST00000121239 375 ntBASIC16.29■□□□□ 0.2
Vps13aQ5H8C4 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vps13aQ5H8C4 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Vps13aQ5H8C4 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps13aQ5H8C4 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps13aQ5H8C4 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.28■□□□□ 0.2
Vps13aQ5H8C4 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vps13aQ5H8C4 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vps13aQ5H8C4 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Vps13aQ5H8C4 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps13aQ5H8C4 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Vps13aQ5H8C4 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps13aQ5H8C4 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps13aQ5H8C4 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vps13aQ5H8C4 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vps13aQ5H8C4 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vps13aQ5H8C4 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.28■□□□□ 0.2
Vps13aQ5H8C4 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vps13aQ5H8C4 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.28■□□□□ 0.2
Vps13aQ5H8C4 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps13aQ5H8C4 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vps13aQ5H8C4 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps13aQ5H8C4 Gm27300-201ENSMUST00000184085 97 ntBASIC16.28■□□□□ 0.2
Vps13aQ5H8C4 Gm27335-201ENSMUST00000184758 97 ntBASIC16.28■□□□□ 0.2
Vps13aQ5H8C4 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vps13aQ5H8C4 AC130829.1-201ENSMUST00000221548 494 ntBASIC16.28■□□□□ 0.2
Vps13aQ5H8C4 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps13aQ5H8C4 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Vps13aQ5H8C4 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps13aQ5H8C4 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
Vps13aQ5H8C4 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps13aQ5H8C4 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Vps13aQ5H8C4 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vps13aQ5H8C4 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vps13aQ5H8C4 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Vps13aQ5H8C4 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vps13aQ5H8C4 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps13aQ5H8C4 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps13aQ5H8C4 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.26■□□□□ 0.19
Vps13aQ5H8C4 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps13aQ5H8C4 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps13aQ5H8C4 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps13aQ5H8C4 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vps13aQ5H8C4 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps13aQ5H8C4 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps13aQ5H8C4 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.26■□□□□ 0.19
Vps13aQ5H8C4 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps13aQ5H8C4 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps13aQ5H8C4 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vps13aQ5H8C4 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps13aQ5H8C4 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps13aQ5H8C4 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps13aQ5H8C4 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vps13aQ5H8C4 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vps13aQ5H8C4 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.26■□□□□ 0.19
Vps13aQ5H8C4 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.26■□□□□ 0.19
Vps13aQ5H8C4 Gm27622-201ENSMUST00000183779 60 ntBASIC16.26■□□□□ 0.19
Vps13aQ5H8C4 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Vps13aQ5H8C4 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps13aQ5H8C4 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms