Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tmem40Q4FJU9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Tmem40Q4FJU9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tmem40Q4FJU9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tmem40Q4FJU9 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tmem40Q4FJU9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tmem40Q4FJU9 Gm13884-201ENSMUST00000118103 829 ntBASIC14.02□□□□□ -0.17
Tmem40Q4FJU9 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tmem40Q4FJU9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.02□□□□□ -0.17
Tmem40Q4FJU9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.02□□□□□ -0.17
Tmem40Q4FJU9 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.02□□□□□ -0.17
Tmem40Q4FJU9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Tmem40Q4FJU9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tmem40Q4FJU9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tmem40Q4FJU9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tmem40Q4FJU9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Tmem40Q4FJU9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem40Q4FJU9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem40Q4FJU9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem40Q4FJU9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem40Q4FJU9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem40Q4FJU9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem40Q4FJU9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem40Q4FJU9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem40Q4FJU9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem40Q4FJU9 Gm13216-201ENSMUST00000117145 591 ntBASIC14.01□□□□□ -0.17
Tmem40Q4FJU9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tmem40Q4FJU9 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem40Q4FJU9 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.01□□□□□ -0.17
Tmem40Q4FJU9 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem40Q4FJU9 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem40Q4FJU9 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.01□□□□□ -0.17
Tmem40Q4FJU9 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem40Q4FJU9 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem40Q4FJU9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.01□□□□□ -0.17
Tmem40Q4FJU9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem40Q4FJU9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem40Q4FJU9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem40Q4FJU9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem40Q4FJU9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.01□□□□□ -0.17
Tmem40Q4FJU9 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem40Q4FJU9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem40Q4FJU9 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem40Q4FJU9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem40Q4FJU9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Tmem40Q4FJU9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tmem40Q4FJU9 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tmem40Q4FJU9 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tmem40Q4FJU9 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tmem40Q4FJU9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tmem40Q4FJU9 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tmem40Q4FJU9 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Tmem40Q4FJU9 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Tmem40Q4FJU9 Gm12895-201ENSMUST00000122214 226 ntBASIC14□□□□□ -0.17
Tmem40Q4FJU9 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14□□□□□ -0.17
Tmem40Q4FJU9 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tmem40Q4FJU9 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14□□□□□ -0.17
Tmem40Q4FJU9 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14□□□□□ -0.17
Tmem40Q4FJU9 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14□□□□□ -0.17
Tmem40Q4FJU9 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tmem40Q4FJU9 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14□□□□□ -0.17
Tmem40Q4FJU9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Tmem40Q4FJU9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tmem40Q4FJU9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tmem40Q4FJU9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tmem40Q4FJU9 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Tmem40Q4FJU9 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tmem40Q4FJU9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tmem40Q4FJU9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tmem40Q4FJU9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Tmem40Q4FJU9 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.99□□□□□ -0.17
Tmem40Q4FJU9 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tmem40Q4FJU9 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.99□□□□□ -0.17
Tmem40Q4FJU9 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.99□□□□□ -0.17
Tmem40Q4FJU9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tmem40Q4FJU9 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tmem40Q4FJU9 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tmem40Q4FJU9 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tmem40Q4FJU9 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tmem40Q4FJU9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tmem40Q4FJU9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tmem40Q4FJU9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Tmem40Q4FJU9 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Tmem40Q4FJU9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tmem40Q4FJU9 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Tmem40Q4FJU9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tmem40Q4FJU9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tmem40Q4FJU9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tmem40Q4FJU9 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Tmem40Q4FJU9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tmem40Q4FJU9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tmem40Q4FJU9 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tmem40Q4FJU9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tmem40Q4FJU9 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.98□□□□□ -0.17
Tmem40Q4FJU9 Gm11452-201ENSMUST00000122376 690 ntBASIC13.98□□□□□ -0.17
Tmem40Q4FJU9 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.98□□□□□ -0.17
Tmem40Q4FJU9 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Tmem40Q4FJU9 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Tmem40Q4FJU9 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tmem40Q4FJU9 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms