Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Gm6623-201ENSMUST00000173570 544 ntBASIC18.94■□□□□ 0.62
Ckap2Q3V1H1 Gm17808-201ENSMUST00000200859 894 ntBASIC18.94■□□□□ 0.62
Ckap2Q3V1H1 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Ckap2Q3V1H1 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ckap2Q3V1H1 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ckap2Q3V1H1 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Ckap2Q3V1H1 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ckap2Q3V1H1 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ckap2Q3V1H1 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ckap2Q3V1H1 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ckap2Q3V1H1 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ckap2Q3V1H1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Ckap2Q3V1H1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ckap2Q3V1H1 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Ckap2Q3V1H1 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ckap2Q3V1H1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ckap2Q3V1H1 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Ckap2Q3V1H1 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ckap2Q3V1H1 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Ckap2Q3V1H1 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.93■□□□□ 0.62
Ckap2Q3V1H1 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ckap2Q3V1H1 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ckap2Q3V1H1 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.93■□□□□ 0.62
Ckap2Q3V1H1 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Ckap2Q3V1H1 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ckap2Q3V1H1 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Ckap2Q3V1H1 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Ckap2Q3V1H1 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ckap2Q3V1H1 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ckap2Q3V1H1 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Ckap2Q3V1H1 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Ckap2Q3V1H1 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ckap2Q3V1H1 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Ckap2Q3V1H1 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.93■□□□□ 0.62
Ckap2Q3V1H1 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.93■□□□□ 0.62
Ckap2Q3V1H1 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ckap2Q3V1H1 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ckap2Q3V1H1 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Ckap2Q3V1H1 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.93■□□□□ 0.62
Ckap2Q3V1H1 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ckap2Q3V1H1 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ckap2Q3V1H1 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ckap2Q3V1H1 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ckap2Q3V1H1 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ckap2Q3V1H1 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ckap2Q3V1H1 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.92■□□□□ 0.62
Ckap2Q3V1H1 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ckap2Q3V1H1 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ckap2Q3V1H1 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ckap2Q3V1H1 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Ckap2Q3V1H1 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ckap2Q3V1H1 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ckap2Q3V1H1 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ckap2Q3V1H1 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ckap2Q3V1H1 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ckap2Q3V1H1 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ckap2Q3V1H1 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ckap2Q3V1H1 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ckap2Q3V1H1 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ckap2Q3V1H1 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ckap2Q3V1H1 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ckap2Q3V1H1 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ckap2Q3V1H1 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ckap2Q3V1H1 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ckap2Q3V1H1 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ckap2Q3V1H1 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ckap2Q3V1H1 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ckap2Q3V1H1 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Ckap2Q3V1H1 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ckap2Q3V1H1 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Ckap2Q3V1H1 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ckap2Q3V1H1 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ckap2Q3V1H1 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ckap2Q3V1H1 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ckap2Q3V1H1 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ckap2Q3V1H1 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ckap2Q3V1H1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ckap2Q3V1H1 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ckap2Q3V1H1 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ckap2Q3V1H1 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Ckap2Q3V1H1 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ckap2Q3V1H1 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ckap2Q3V1H1 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Ckap2Q3V1H1 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.91■□□□□ 0.62
Ckap2Q3V1H1 Gm44430-201ENSMUST00000203376 995 ntBASIC18.91■□□□□ 0.62
Ckap2Q3V1H1 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ckap2Q3V1H1 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ckap2Q3V1H1 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ckap2Q3V1H1 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.91■□□□□ 0.62
Ckap2Q3V1H1 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ckap2Q3V1H1 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ckap2Q3V1H1 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ckap2Q3V1H1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.9■□□□□ 0.62
Ckap2Q3V1H1 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Ckap2Q3V1H1 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ckap2Q3V1H1 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Ckap2Q3V1H1 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ckap2Q3V1H1 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ckap2Q3V1H1 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Ckap2Q3V1H1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms