Protein–RNA interactions for Protein: Q3UZ39

Lrrfip1, Leucine-rich repeat flightless-interacting protein 1, mousemouse

Known RBP Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrfip1Q3UZ39 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrrfip1Q3UZ39 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrrfip1Q3UZ39 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lrrfip1Q3UZ39 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrrfip1Q3UZ39 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrrfip1Q3UZ39 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrrfip1Q3UZ39 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.75■□□□□ 0.59
Lrrfip1Q3UZ39 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.75■□□□□ 0.59
Lrrfip1Q3UZ39 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lrrfip1Q3UZ39 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.75■□□□□ 0.59
Lrrfip1Q3UZ39 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lrrfip1Q3UZ39 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.75■□□□□ 0.59
Lrrfip1Q3UZ39 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Lrrfip1Q3UZ39 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrrfip1Q3UZ39 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrrfip1Q3UZ39 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Lrrfip1Q3UZ39 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrrfip1Q3UZ39 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrrfip1Q3UZ39 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrrfip1Q3UZ39 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrrfip1Q3UZ39 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.75■□□□□ 0.59
Lrrfip1Q3UZ39 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrrfip1Q3UZ39 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrrfip1Q3UZ39 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrrfip1Q3UZ39 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrrfip1Q3UZ39 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Lrrfip1Q3UZ39 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
Lrrfip1Q3UZ39 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Lrrfip1Q3UZ39 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrrfip1Q3UZ39 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.74■□□□□ 0.59
Lrrfip1Q3UZ39 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.74■□□□□ 0.59
Lrrfip1Q3UZ39 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.74■□□□□ 0.59
Lrrfip1Q3UZ39 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lrrfip1Q3UZ39 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrrfip1Q3UZ39 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.74■□□□□ 0.59
Lrrfip1Q3UZ39 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrrfip1Q3UZ39 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrrfip1Q3UZ39 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrrfip1Q3UZ39 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.74■□□□□ 0.59
Lrrfip1Q3UZ39 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Lrrfip1Q3UZ39 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Lrrfip1Q3UZ39 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrrfip1Q3UZ39 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrfip1Q3UZ39 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrfip1Q3UZ39 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrfip1Q3UZ39 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrfip1Q3UZ39 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrfip1Q3UZ39 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrfip1Q3UZ39 Mir770-201ENSMUST00000103252 94 ntBASIC18.73■□□□□ 0.59
Lrrfip1Q3UZ39 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrfip1Q3UZ39 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.73■□□□□ 0.59
Lrrfip1Q3UZ39 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrfip1Q3UZ39 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrfip1Q3UZ39 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrfip1Q3UZ39 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Lrrfip1Q3UZ39 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.73■□□□□ 0.59
Lrrfip1Q3UZ39 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrfip1Q3UZ39 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrfip1Q3UZ39 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrfip1Q3UZ39 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrfip1Q3UZ39 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrfip1Q3UZ39 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrfip1Q3UZ39 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lrrfip1Q3UZ39 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lrrfip1Q3UZ39 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lrrfip1Q3UZ39 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Lrrfip1Q3UZ39 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.72■□□□□ 0.59
Lrrfip1Q3UZ39 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Lrrfip1Q3UZ39 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lrrfip1Q3UZ39 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lrrfip1Q3UZ39 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lrrfip1Q3UZ39 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lrrfip1Q3UZ39 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Lrrfip1Q3UZ39 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.72■□□□□ 0.59
Lrrfip1Q3UZ39 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lrrfip1Q3UZ39 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Lrrfip1Q3UZ39 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lrrfip1Q3UZ39 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.71■□□□□ 0.59
Lrrfip1Q3UZ39 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lrrfip1Q3UZ39 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lrrfip1Q3UZ39 Gm29518-201ENSMUST00000190858 372 ntBASIC18.71■□□□□ 0.59
Lrrfip1Q3UZ39 Gm17808-201ENSMUST00000200859 894 ntBASIC18.71■□□□□ 0.59
Lrrfip1Q3UZ39 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lrrfip1Q3UZ39 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lrrfip1Q3UZ39 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lrrfip1Q3UZ39 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Lrrfip1Q3UZ39 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.71■□□□□ 0.59
Lrrfip1Q3UZ39 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lrrfip1Q3UZ39 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Lrrfip1Q3UZ39 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lrrfip1Q3UZ39 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.7■□□□□ 0.58
Lrrfip1Q3UZ39 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lrrfip1Q3UZ39 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.7■□□□□ 0.58
Lrrfip1Q3UZ39 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Lrrfip1Q3UZ39 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lrrfip1Q3UZ39 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Lrrfip1Q3UZ39 Gm6623-201ENSMUST00000173570 544 ntBASIC18.7■□□□□ 0.58
Lrrfip1Q3UZ39 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lrrfip1Q3UZ39 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.7■□□□□ 0.58
Lrrfip1Q3UZ39 Gm33142-201ENSMUST00000193913 867 ntBASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms