Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Naf1Q3UMQ8 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Naf1Q3UMQ8 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Naf1Q3UMQ8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Naf1Q3UMQ8 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.75■□□□□ 0.27
Naf1Q3UMQ8 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.75■□□□□ 0.27
Naf1Q3UMQ8 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Naf1Q3UMQ8 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Naf1Q3UMQ8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Naf1Q3UMQ8 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Naf1Q3UMQ8 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.75■□□□□ 0.27
Naf1Q3UMQ8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Naf1Q3UMQ8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Naf1Q3UMQ8 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Naf1Q3UMQ8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Naf1Q3UMQ8 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Naf1Q3UMQ8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Naf1Q3UMQ8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Naf1Q3UMQ8 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Naf1Q3UMQ8 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Naf1Q3UMQ8 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Naf1Q3UMQ8 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Naf1Q3UMQ8 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Naf1Q3UMQ8 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Naf1Q3UMQ8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Naf1Q3UMQ8 Gm24589-201ENSMUST00000116692 94 ntBASIC16.74■□□□□ 0.27
Naf1Q3UMQ8 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Naf1Q3UMQ8 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Naf1Q3UMQ8 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.74■□□□□ 0.27
Naf1Q3UMQ8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Naf1Q3UMQ8 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.74■□□□□ 0.27
Naf1Q3UMQ8 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.74■□□□□ 0.27
Naf1Q3UMQ8 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Naf1Q3UMQ8 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Naf1Q3UMQ8 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Naf1Q3UMQ8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Naf1Q3UMQ8 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Naf1Q3UMQ8 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Naf1Q3UMQ8 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Naf1Q3UMQ8 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.74■□□□□ 0.27
Naf1Q3UMQ8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Naf1Q3UMQ8 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Naf1Q3UMQ8 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Naf1Q3UMQ8 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Naf1Q3UMQ8 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Naf1Q3UMQ8 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Naf1Q3UMQ8 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Naf1Q3UMQ8 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Naf1Q3UMQ8 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.73■□□□□ 0.27
Naf1Q3UMQ8 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Naf1Q3UMQ8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Naf1Q3UMQ8 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Naf1Q3UMQ8 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Naf1Q3UMQ8 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Naf1Q3UMQ8 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Naf1Q3UMQ8 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Naf1Q3UMQ8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Naf1Q3UMQ8 Gm12895-201ENSMUST00000122214 226 ntBASIC16.73■□□□□ 0.27
Naf1Q3UMQ8 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.73■□□□□ 0.27
Naf1Q3UMQ8 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Naf1Q3UMQ8 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Naf1Q3UMQ8 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Naf1Q3UMQ8 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Naf1Q3UMQ8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Naf1Q3UMQ8 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Naf1Q3UMQ8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Naf1Q3UMQ8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Naf1Q3UMQ8 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Naf1Q3UMQ8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Naf1Q3UMQ8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.72■□□□□ 0.27
Naf1Q3UMQ8 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Naf1Q3UMQ8 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Naf1Q3UMQ8 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.72■□□□□ 0.27
Naf1Q3UMQ8 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Naf1Q3UMQ8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Naf1Q3UMQ8 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Naf1Q3UMQ8 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Naf1Q3UMQ8 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Naf1Q3UMQ8 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Naf1Q3UMQ8 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
Naf1Q3UMQ8 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Naf1Q3UMQ8 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Naf1Q3UMQ8 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Naf1Q3UMQ8 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Naf1Q3UMQ8 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Naf1Q3UMQ8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Naf1Q3UMQ8 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Naf1Q3UMQ8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.72■□□□□ 0.27
Naf1Q3UMQ8 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Naf1Q3UMQ8 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Naf1Q3UMQ8 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Naf1Q3UMQ8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Naf1Q3UMQ8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Naf1Q3UMQ8 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.72■□□□□ 0.27
Naf1Q3UMQ8 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Naf1Q3UMQ8 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.72■□□□□ 0.27
Naf1Q3UMQ8 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.72■□□□□ 0.27
Naf1Q3UMQ8 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Naf1Q3UMQ8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Naf1Q3UMQ8 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms