Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pdlim7Q3TJD7 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pdlim7Q3TJD7 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Pdlim7Q3TJD7 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdlim7Q3TJD7 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC18.5■□□□□ 0.55
Pdlim7Q3TJD7 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.5■□□□□ 0.55
Pdlim7Q3TJD7 Gm11780-201ENSMUST00000136880 516 ntBASIC18.5■□□□□ 0.55
Pdlim7Q3TJD7 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC18.5■□□□□ 0.55
Pdlim7Q3TJD7 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.5■□□□□ 0.55
Pdlim7Q3TJD7 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdlim7Q3TJD7 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdlim7Q3TJD7 Gm10175-201ENSMUST00000086013 645 ntBASIC18.5■□□□□ 0.55
Pdlim7Q3TJD7 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdlim7Q3TJD7 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdlim7Q3TJD7 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdlim7Q3TJD7 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pdlim7Q3TJD7 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdlim7Q3TJD7 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Pdlim7Q3TJD7 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.49■□□□□ 0.55
Pdlim7Q3TJD7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim7Q3TJD7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim7Q3TJD7 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim7Q3TJD7 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim7Q3TJD7 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim7Q3TJD7 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC18.49■□□□□ 0.55
Pdlim7Q3TJD7 Gm26308-201ENSMUST00000157768 69 ntBASIC18.49■□□□□ 0.55
Pdlim7Q3TJD7 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.49■□□□□ 0.55
Pdlim7Q3TJD7 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pdlim7Q3TJD7 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim7Q3TJD7 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim7Q3TJD7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Pdlim7Q3TJD7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pdlim7Q3TJD7 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.49■□□□□ 0.55
Pdlim7Q3TJD7 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim7Q3TJD7 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim7Q3TJD7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim7Q3TJD7 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim7Q3TJD7 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim7Q3TJD7 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim7Q3TJD7 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim7Q3TJD7 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim7Q3TJD7 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim7Q3TJD7 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Pdlim7Q3TJD7 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim7Q3TJD7 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.48■□□□□ 0.55
Pdlim7Q3TJD7 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Pdlim7Q3TJD7 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim7Q3TJD7 AC151286.1-201ENSMUST00000198489 145 ntBASIC18.48■□□□□ 0.55
Pdlim7Q3TJD7 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim7Q3TJD7 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim7Q3TJD7 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Pdlim7Q3TJD7 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim7Q3TJD7 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.48■□□□□ 0.55
Pdlim7Q3TJD7 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Pdlim7Q3TJD7 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.47■□□□□ 0.55
Pdlim7Q3TJD7 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim7Q3TJD7 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim7Q3TJD7 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.47■□□□□ 0.55
Pdlim7Q3TJD7 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.47■□□□□ 0.55
Pdlim7Q3TJD7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim7Q3TJD7 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim7Q3TJD7 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Pdlim7Q3TJD7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim7Q3TJD7 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Pdlim7Q3TJD7 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Pdlim7Q3TJD7 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim7Q3TJD7 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim7Q3TJD7 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.47■□□□□ 0.55
Pdlim7Q3TJD7 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.47■□□□□ 0.55
Pdlim7Q3TJD7 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.47■□□□□ 0.55
Pdlim7Q3TJD7 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.47■□□□□ 0.55
Pdlim7Q3TJD7 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim7Q3TJD7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim7Q3TJD7 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.47■□□□□ 0.55
Pdlim7Q3TJD7 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim7Q3TJD7 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim7Q3TJD7 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Pdlim7Q3TJD7 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.46■□□□□ 0.55
Pdlim7Q3TJD7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pdlim7Q3TJD7 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pdlim7Q3TJD7 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pdlim7Q3TJD7 Gm4459-201ENSMUST00000118750 468 ntBASIC18.46■□□□□ 0.55
Pdlim7Q3TJD7 Gm12497-201ENSMUST00000138778 237 ntBASIC18.46■□□□□ 0.55
Pdlim7Q3TJD7 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pdlim7Q3TJD7 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.46■□□□□ 0.55
Pdlim7Q3TJD7 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.46■□□□□ 0.55
Pdlim7Q3TJD7 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC18.46■□□□□ 0.55
Pdlim7Q3TJD7 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pdlim7Q3TJD7 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pdlim7Q3TJD7 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pdlim7Q3TJD7 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.46■□□□□ 0.55
Pdlim7Q3TJD7 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pdlim7Q3TJD7 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pdlim7Q3TJD7 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pdlim7Q3TJD7 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Pdlim7Q3TJD7 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pdlim7Q3TJD7 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.45■□□□□ 0.54
Pdlim7Q3TJD7 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pdlim7Q3TJD7 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pdlim7Q3TJD7 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms