Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Khdc4Q3TCX3 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Khdc4Q3TCX3 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Khdc4Q3TCX3 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Khdc4Q3TCX3 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.7■□□□□ 0.1
Khdc4Q3TCX3 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Khdc4Q3TCX3 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.7■□□□□ 0.1
Khdc4Q3TCX3 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Khdc4Q3TCX3 Gm7461-201ENSMUST00000058918 827 ntBASIC15.7■□□□□ 0.1
Khdc4Q3TCX3 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Khdc4Q3TCX3 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Khdc4Q3TCX3 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Khdc4Q3TCX3 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Khdc4Q3TCX3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Khdc4Q3TCX3 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.69■□□□□ 0.1
Khdc4Q3TCX3 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Khdc4Q3TCX3 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Khdc4Q3TCX3 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Khdc4Q3TCX3 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Khdc4Q3TCX3 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Khdc4Q3TCX3 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Khdc4Q3TCX3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Khdc4Q3TCX3 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.69■□□□□ 0.1
Khdc4Q3TCX3 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Khdc4Q3TCX3 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Khdc4Q3TCX3 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Khdc4Q3TCX3 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Khdc4Q3TCX3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.69■□□□□ 0.1
Khdc4Q3TCX3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Khdc4Q3TCX3 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Khdc4Q3TCX3 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Khdc4Q3TCX3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Khdc4Q3TCX3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.68■□□□□ 0.1
Khdc4Q3TCX3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Khdc4Q3TCX3 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Khdc4Q3TCX3 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Khdc4Q3TCX3 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Khdc4Q3TCX3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Khdc4Q3TCX3 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Khdc4Q3TCX3 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Khdc4Q3TCX3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Khdc4Q3TCX3 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Khdc4Q3TCX3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Khdc4Q3TCX3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Khdc4Q3TCX3 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Khdc4Q3TCX3 Mir3081-201ENSMUST00000175305 84 ntBASIC15.68■□□□□ 0.1
Khdc4Q3TCX3 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Khdc4Q3TCX3 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.68■□□□□ 0.1
Khdc4Q3TCX3 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Khdc4Q3TCX3 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Khdc4Q3TCX3 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Khdc4Q3TCX3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Khdc4Q3TCX3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.68■□□□□ 0.1
Khdc4Q3TCX3 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Khdc4Q3TCX3 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Khdc4Q3TCX3 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Khdc4Q3TCX3 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Khdc4Q3TCX3 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.68■□□□□ 0.1
Khdc4Q3TCX3 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Khdc4Q3TCX3 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.67■□□□□ 0.1
Khdc4Q3TCX3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Khdc4Q3TCX3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Khdc4Q3TCX3 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Khdc4Q3TCX3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Khdc4Q3TCX3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Khdc4Q3TCX3 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Khdc4Q3TCX3 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Khdc4Q3TCX3 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Khdc4Q3TCX3 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Khdc4Q3TCX3 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Khdc4Q3TCX3 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Khdc4Q3TCX3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Khdc4Q3TCX3 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Khdc4Q3TCX3 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Khdc4Q3TCX3 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Khdc4Q3TCX3 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Khdc4Q3TCX3 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Khdc4Q3TCX3 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Khdc4Q3TCX3 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Khdc4Q3TCX3 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.67■□□□□ 0.1
Khdc4Q3TCX3 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Khdc4Q3TCX3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Khdc4Q3TCX3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Khdc4Q3TCX3 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Khdc4Q3TCX3 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Khdc4Q3TCX3 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Khdc4Q3TCX3 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Khdc4Q3TCX3 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Khdc4Q3TCX3 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Khdc4Q3TCX3 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Khdc4Q3TCX3 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.66■□□□□ 0.1
Khdc4Q3TCX3 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Khdc4Q3TCX3 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Khdc4Q3TCX3 Gm27742-201ENSMUST00000184667 60 ntBASIC15.66■□□□□ 0.1
Khdc4Q3TCX3 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.66■□□□□ 0.1
Khdc4Q3TCX3 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Khdc4Q3TCX3 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Khdc4Q3TCX3 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Khdc4Q3TCX3 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Khdc4Q3TCX3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms