Protein–RNA interactions for Protein: Q2VWQ2

Nell1, Protein kinase C-binding protein NELL1, mousemouse

Predictions only

Length 810 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nell1Q2VWQ2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nell1Q2VWQ2 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nell1Q2VWQ2 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nell1Q2VWQ2 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Nell1Q2VWQ2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nell1Q2VWQ2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nell1Q2VWQ2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nell1Q2VWQ2 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Nell1Q2VWQ2 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.13■□□□□ 0.17
Nell1Q2VWQ2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nell1Q2VWQ2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Nell1Q2VWQ2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nell1Q2VWQ2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.13■□□□□ 0.17
Nell1Q2VWQ2 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nell1Q2VWQ2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nell1Q2VWQ2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nell1Q2VWQ2 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nell1Q2VWQ2 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nell1Q2VWQ2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Nell1Q2VWQ2 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nell1Q2VWQ2 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nell1Q2VWQ2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Nell1Q2VWQ2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nell1Q2VWQ2 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nell1Q2VWQ2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nell1Q2VWQ2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nell1Q2VWQ2 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nell1Q2VWQ2 Gm11336-201ENSMUST00000118168 334 ntBASIC16.12■□□□□ 0.17
Nell1Q2VWQ2 Gm1401-201ENSMUST00000122048 772 ntBASIC16.12■□□□□ 0.17
Nell1Q2VWQ2 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.12■□□□□ 0.17
Nell1Q2VWQ2 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nell1Q2VWQ2 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nell1Q2VWQ2 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Nell1Q2VWQ2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.12■□□□□ 0.17
Nell1Q2VWQ2 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nell1Q2VWQ2 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.12■□□□□ 0.17
Nell1Q2VWQ2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nell1Q2VWQ2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nell1Q2VWQ2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nell1Q2VWQ2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nell1Q2VWQ2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nell1Q2VWQ2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nell1Q2VWQ2 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.12■□□□□ 0.17
Nell1Q2VWQ2 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Nell1Q2VWQ2 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Nell1Q2VWQ2 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nell1Q2VWQ2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nell1Q2VWQ2 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nell1Q2VWQ2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nell1Q2VWQ2 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nell1Q2VWQ2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nell1Q2VWQ2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nell1Q2VWQ2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Nell1Q2VWQ2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nell1Q2VWQ2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nell1Q2VWQ2 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.11■□□□□ 0.17
Nell1Q2VWQ2 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nell1Q2VWQ2 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nell1Q2VWQ2 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.11■□□□□ 0.17
Nell1Q2VWQ2 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.11■□□□□ 0.17
Nell1Q2VWQ2 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nell1Q2VWQ2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nell1Q2VWQ2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nell1Q2VWQ2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.11■□□□□ 0.17
Nell1Q2VWQ2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nell1Q2VWQ2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nell1Q2VWQ2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nell1Q2VWQ2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nell1Q2VWQ2 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nell1Q2VWQ2 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nell1Q2VWQ2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.1■□□□□ 0.17
Nell1Q2VWQ2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.1■□□□□ 0.17
Nell1Q2VWQ2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nell1Q2VWQ2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nell1Q2VWQ2 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.1■□□□□ 0.17
Nell1Q2VWQ2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Nell1Q2VWQ2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nell1Q2VWQ2 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nell1Q2VWQ2 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nell1Q2VWQ2 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.1■□□□□ 0.17
Nell1Q2VWQ2 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nell1Q2VWQ2 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nell1Q2VWQ2 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.1■□□□□ 0.17
Nell1Q2VWQ2 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.1■□□□□ 0.17
Nell1Q2VWQ2 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Nell1Q2VWQ2 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.1■□□□□ 0.17
Nell1Q2VWQ2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.1■□□□□ 0.17
Nell1Q2VWQ2 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nell1Q2VWQ2 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nell1Q2VWQ2 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nell1Q2VWQ2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Nell1Q2VWQ2 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nell1Q2VWQ2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nell1Q2VWQ2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.1■□□□□ 0.17
Nell1Q2VWQ2 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Nell1Q2VWQ2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Nell1Q2VWQ2 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nell1Q2VWQ2 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nell1Q2VWQ2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Nell1Q2VWQ2 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms