Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Npas1P97459 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Npas1P97459 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Npas1P97459 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Npas1P97459 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Npas1P97459 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Npas1P97459 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Npas1P97459 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Npas1P97459 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Npas1P97459 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Npas1P97459 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Npas1P97459 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Npas1P97459 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Npas1P97459 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Npas1P97459 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Npas1P97459 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.87□□□□□ -0.19
Npas1P97459 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Npas1P97459 Flg-201ENSMUST00000050758 1488 ntBASIC13.87□□□□□ -0.19
Npas1P97459 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.87□□□□□ -0.19
Npas1P97459 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Npas1P97459 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Npas1P97459 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.87□□□□□ -0.19
Npas1P97459 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.87□□□□□ -0.19
Npas1P97459 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Npas1P97459 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Npas1P97459 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Npas1P97459 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Npas1P97459 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Npas1P97459 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC13.87□□□□□ -0.19
Npas1P97459 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Npas1P97459 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Npas1P97459 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Npas1P97459 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Npas1P97459 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Npas1P97459 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Npas1P97459 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Npas1P97459 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Npas1P97459 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Npas1P97459 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Npas1P97459 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Npas1P97459 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.87□□□□□ -0.19
Npas1P97459 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Npas1P97459 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Npas1P97459 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Npas1P97459 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Npas1P97459 Gm10654-201ENSMUST00000098653 1633 ntBASIC13.86□□□□□ -0.19
Npas1P97459 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Npas1P97459 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Npas1P97459 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Npas1P97459 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Npas1P97459 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Npas1P97459 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Npas1P97459 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Npas1P97459 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC13.86□□□□□ -0.19
Npas1P97459 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Npas1P97459 Gm11927-201ENSMUST00000118472 759 ntBASIC13.86□□□□□ -0.19
Npas1P97459 Gm13148-201ENSMUST00000118892 745 ntBASIC13.86□□□□□ -0.19
Npas1P97459 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC13.86□□□□□ -0.19
Npas1P97459 Gm26524-201ENSMUST00000192339 390 ntBASIC13.86□□□□□ -0.19
Npas1P97459 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Npas1P97459 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Npas1P97459 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.86□□□□□ -0.19
Npas1P97459 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Npas1P97459 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Npas1P97459 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Npas1P97459 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Npas1P97459 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Npas1P97459 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Npas1P97459 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Npas1P97459 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Npas1P97459 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Npas1P97459 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Npas1P97459 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Npas1P97459 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Npas1P97459 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Npas1P97459 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Npas1P97459 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Npas1P97459 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Npas1P97459 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC13.85□□□□□ -0.19
Npas1P97459 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC13.85□□□□□ -0.19
Npas1P97459 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Npas1P97459 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Npas1P97459 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Npas1P97459 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Npas1P97459 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Npas1P97459 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Npas1P97459 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Npas1P97459 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Npas1P97459 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC13.85□□□□□ -0.19
Npas1P97459 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Npas1P97459 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Npas1P97459 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Npas1P97459 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Npas1P97459 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Npas1P97459 Gm29241-201ENSMUST00000189260 1096 ntBASIC13.85□□□□□ -0.19
Npas1P97459 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC13.85□□□□□ -0.19
Npas1P97459 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC13.85□□□□□ -0.19
Npas1P97459 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Npas1P97459 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Npas1P97459 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms