Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm24721-201ENSMUST00000103849 110 ntBASIC11.26□□□□□ -0.61
PrkdcP97313 Gm28018-201ENSMUST00000103869 110 ntBASIC11.26□□□□□ -0.61
PrkdcP97313 Gm26399-201ENSMUST00000103937 110 ntBASIC11.26□□□□□ -0.61
PrkdcP97313 Mir449b-201ENSMUST00000104833 80 ntBASIC11.26□□□□□ -0.61
PrkdcP97313 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkdcP97313 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC11.26□□□□□ -0.61
PrkdcP97313 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC11.26□□□□□ -0.61
PrkdcP97313 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
PrkdcP97313 Gm25349-201ENSMUST00000177728 110 ntBASIC11.26□□□□□ -0.61
PrkdcP97313 Gm23616-201ENSMUST00000177797 110 ntBASIC11.26□□□□□ -0.61
PrkdcP97313 Gm25871-201ENSMUST00000177816 110 ntBASIC11.26□□□□□ -0.61
PrkdcP97313 Gm24752-201ENSMUST00000178240 110 ntBASIC11.26□□□□□ -0.61
PrkdcP97313 Gm24496-201ENSMUST00000178287 110 ntBASIC11.26□□□□□ -0.61
PrkdcP97313 Gm25649-201ENSMUST00000178476 110 ntBASIC11.26□□□□□ -0.61
PrkdcP97313 Gm25548-201ENSMUST00000178681 110 ntBASIC11.26□□□□□ -0.61
PrkdcP97313 Gm23147-201ENSMUST00000178841 110 ntBASIC11.26□□□□□ -0.61
PrkdcP97313 Gm26095-201ENSMUST00000179270 110 ntBASIC11.26□□□□□ -0.61
PrkdcP97313 Gm22171-201ENSMUST00000179283 110 ntBASIC11.26□□□□□ -0.61
PrkdcP97313 Gm23936-201ENSMUST00000179354 110 ntBASIC11.26□□□□□ -0.61
PrkdcP97313 Gm22619-201ENSMUST00000179516 110 ntBASIC11.26□□□□□ -0.61
PrkdcP97313 Gm25255-201ENSMUST00000179579 110 ntBASIC11.26□□□□□ -0.61
PrkdcP97313 Gm24755-201ENSMUST00000179691 110 ntBASIC11.26□□□□□ -0.61
PrkdcP97313 Gm26506-201ENSMUST00000179692 110 ntBASIC11.26□□□□□ -0.61
PrkdcP97313 Gm25086-201ENSMUST00000179931 110 ntBASIC11.26□□□□□ -0.61
PrkdcP97313 Gm23243-201ENSMUST00000180047 110 ntBASIC11.26□□□□□ -0.61
PrkdcP97313 Gm24659-201ENSMUST00000180212 110 ntBASIC11.26□□□□□ -0.61
PrkdcP97313 Gm24169-201ENSMUST00000180244 110 ntBASIC11.26□□□□□ -0.61
PrkdcP97313 Gm23689-201ENSMUST00000180354 110 ntBASIC11.26□□□□□ -0.61
PrkdcP97313 Gm27359-201ENSMUST00000184153 110 ntBASIC11.26□□□□□ -0.61
PrkdcP97313 Gm27785-201ENSMUST00000184268 110 ntBASIC11.26□□□□□ -0.61
PrkdcP97313 Gm27466-201ENSMUST00000184396 110 ntBASIC11.26□□□□□ -0.61
PrkdcP97313 Gm27703-201ENSMUST00000184836 110 ntBASIC11.26□□□□□ -0.61
PrkdcP97313 Gm45167-201ENSMUST00000208007 322 ntBASIC11.26□□□□□ -0.61
PrkdcP97313 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC11.26□□□□□ -0.61
PrkdcP97313 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkdcP97313 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkdcP97313 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkdcP97313 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkdcP97313 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkdcP97313 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
PrkdcP97313 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
PrkdcP97313 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkdcP97313 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkdcP97313 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkdcP97313 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
PrkdcP97313 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkdcP97313 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkdcP97313 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
PrkdcP97313 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
PrkdcP97313 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkdcP97313 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkdcP97313 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
PrkdcP97313 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
PrkdcP97313 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkdcP97313 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PrkdcP97313 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PrkdcP97313 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
PrkdcP97313 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PrkdcP97313 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC11.25□□□□□ -0.61
PrkdcP97313 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PrkdcP97313 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PrkdcP97313 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC11.25□□□□□ -0.61
PrkdcP97313 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.25□□□□□ -0.61
PrkdcP97313 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PrkdcP97313 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PrkdcP97313 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PrkdcP97313 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PrkdcP97313 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PrkdcP97313 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
PrkdcP97313 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
PrkdcP97313 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PrkdcP97313 AC127302.2-201ENSMUST00000215212 268 ntBASIC11.25□□□□□ -0.61
PrkdcP97313 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PrkdcP97313 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
PrkdcP97313 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
PrkdcP97313 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PrkdcP97313 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
PrkdcP97313 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
PrkdcP97313 Gm18187-201ENSMUST00000196476 984 ntBASIC11.25□□□□□ -0.61
PrkdcP97313 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PrkdcP97313 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
PrkdcP97313 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
PrkdcP97313 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
PrkdcP97313 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC11.24□□□□□ -0.61
PrkdcP97313 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
PrkdcP97313 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC11.24□□□□□ -0.61
PrkdcP97313 Gm6858-201ENSMUST00000208582 1468 ntBASIC11.24□□□□□ -0.61
PrkdcP97313 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11.24□□□□□ -0.61
PrkdcP97313 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC11.24□□□□□ -0.61
PrkdcP97313 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PrkdcP97313 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PrkdcP97313 Fcho2-208ENSMUST00000224992 2964 ntBASIC11.24□□□□□ -0.61
PrkdcP97313 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
PrkdcP97313 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
PrkdcP97313 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PrkdcP97313 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PrkdcP97313 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
PrkdcP97313 Gm15427-201ENSMUST00000117288 531 ntBASIC11.24□□□□□ -0.61
PrkdcP97313 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC11.24□□□□□ -0.61
PrkdcP97313 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms