Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim43bP86448 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim43bP86448 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim43bP86448 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim43bP86448 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim43bP86448 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trim43bP86448 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trim43bP86448 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43bP86448 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43bP86448 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43bP86448 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43bP86448 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43bP86448 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.98■□□□□ 0.31
Trim43bP86448 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trim43bP86448 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trim43bP86448 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trim43bP86448 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43bP86448 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trim43bP86448 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43bP86448 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trim43bP86448 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.98■□□□□ 0.31
Trim43bP86448 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trim43bP86448 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trim43bP86448 Gm43799-201ENSMUST00000201845 579 ntBASIC16.98■□□□□ 0.31
Trim43bP86448 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.98■□□□□ 0.31
Trim43bP86448 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.98■□□□□ 0.31
Trim43bP86448 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43bP86448 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43bP86448 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43bP86448 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43bP86448 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
Trim43bP86448 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43bP86448 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43bP86448 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43bP86448 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.98■□□□□ 0.31
Trim43bP86448 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trim43bP86448 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43bP86448 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43bP86448 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43bP86448 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43bP86448 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43bP86448 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43bP86448 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43bP86448 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43bP86448 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Trim43bP86448 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Trim43bP86448 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.97■□□□□ 0.31
Trim43bP86448 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trim43bP86448 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.97■□□□□ 0.31
Trim43bP86448 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43bP86448 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43bP86448 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43bP86448 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43bP86448 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43bP86448 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43bP86448 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43bP86448 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.97■□□□□ 0.31
Trim43bP86448 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43bP86448 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim43bP86448 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim43bP86448 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim43bP86448 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Trim43bP86448 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim43bP86448 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim43bP86448 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim43bP86448 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Trim43bP86448 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim43bP86448 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.96■□□□□ 0.31
Trim43bP86448 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim43bP86448 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.96■□□□□ 0.31
Trim43bP86448 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim43bP86448 Gm9987-201ENSMUST00000069768 567 ntBASIC16.96■□□□□ 0.31
Trim43bP86448 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim43bP86448 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Trim43bP86448 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Trim43bP86448 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim43bP86448 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim43bP86448 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trim43bP86448 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trim43bP86448 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trim43bP86448 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Trim43bP86448 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
Trim43bP86448 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trim43bP86448 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trim43bP86448 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43bP86448 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43bP86448 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43bP86448 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43bP86448 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43bP86448 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43bP86448 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43bP86448 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43bP86448 Gm13559-201ENSMUST00000120476 863 ntBASIC16.95■□□□□ 0.3
Trim43bP86448 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.95■□□□□ 0.3
Trim43bP86448 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.95■□□□□ 0.3
Trim43bP86448 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43bP86448 Gm38027-201ENSMUST00000192315 235 ntBASIC16.95■□□□□ 0.3
Trim43bP86448 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43bP86448 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trim43bP86448 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms