Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atf1P81269 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atf1P81269 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atf1P81269 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atf1P81269 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Atf1P81269 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Atf1P81269 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atf1P81269 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atf1P81269 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Atf1P81269 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atf1P81269 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atf1P81269 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atf1P81269 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Atf1P81269 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atf1P81269 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atf1P81269 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atf1P81269 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Atf1P81269 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Atf1P81269 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.28□□□□□ -0.12
Atf1P81269 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.28□□□□□ -0.12
Atf1P81269 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Atf1P81269 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Atf1P81269 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Atf1P81269 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Atf1P81269 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.28□□□□□ -0.12
Atf1P81269 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
Atf1P81269 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.28□□□□□ -0.12
Atf1P81269 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atf1P81269 Actl10-202ENSMUST00000226583 1501 ntBASIC14.28□□□□□ -0.12
Atf1P81269 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atf1P81269 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atf1P81269 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atf1P81269 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atf1P81269 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atf1P81269 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atf1P81269 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.27□□□□□ -0.12
Atf1P81269 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Atf1P81269 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atf1P81269 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atf1P81269 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atf1P81269 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atf1P81269 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atf1P81269 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atf1P81269 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atf1P81269 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atf1P81269 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atf1P81269 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atf1P81269 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.27□□□□□ -0.12
Atf1P81269 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atf1P81269 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Atf1P81269 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Atf1P81269 Gm11539-201ENSMUST00000119837 557 ntBASIC14.27□□□□□ -0.13
Atf1P81269 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Atf1P81269 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Atf1P81269 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.27□□□□□ -0.13
Atf1P81269 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.27□□□□□ -0.13
Atf1P81269 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atf1P81269 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.27□□□□□ -0.13
Atf1P81269 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atf1P81269 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Atf1P81269 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Atf1P81269 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Atf1P81269 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.27□□□□□ -0.13
Atf1P81269 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atf1P81269 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atf1P81269 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atf1P81269 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atf1P81269 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atf1P81269 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atf1P81269 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf1P81269 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.26□□□□□ -0.13
Atf1P81269 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf1P81269 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Atf1P81269 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf1P81269 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Atf1P81269 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf1P81269 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf1P81269 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf1P81269 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Atf1P81269 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf1P81269 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf1P81269 Phf7-203ENSMUST00000226565 1971 ntBASIC14.26□□□□□ -0.13
Atf1P81269 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf1P81269 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.26□□□□□ -0.13
Atf1P81269 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.26□□□□□ -0.13
Atf1P81269 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf1P81269 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.26□□□□□ -0.13
Atf1P81269 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.26□□□□□ -0.13
Atf1P81269 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf1P81269 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Atf1P81269 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Atf1P81269 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.26□□□□□ -0.13
Atf1P81269 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.26□□□□□ -0.13
Atf1P81269 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf1P81269 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf1P81269 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf1P81269 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf1P81269 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf1P81269 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf1P81269 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms