Protein–RNA interactions for Protein: P70388

Rad50, DNA repair protein RAD50, mousemouse

Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad50P70388 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rad50P70388 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rad50P70388 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.81■□□□□ 0.76
Rad50P70388 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rad50P70388 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rad50P70388 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rad50P70388 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rad50P70388 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rad50P70388 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Rad50P70388 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rad50P70388 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rad50P70388 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC19.8■□□□□ 0.76
Rad50P70388 Gm27704-201ENSMUST00000185094 107 ntBASIC19.8■□□□□ 0.76
Rad50P70388 Gm29518-201ENSMUST00000190858 372 ntBASIC19.8■□□□□ 0.76
Rad50P70388 Gm18115-201ENSMUST00000221209 621 ntBASIC19.8■□□□□ 0.76
Rad50P70388 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rad50P70388 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rad50P70388 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rad50P70388 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Rad50P70388 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Rad50P70388 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Rad50P70388 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.8■□□□□ 0.76
Rad50P70388 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Rad50P70388 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rad50P70388 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rad50P70388 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Rad50P70388 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Rad50P70388 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rad50P70388 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rad50P70388 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rad50P70388 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Rad50P70388 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rad50P70388 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.79■□□□□ 0.76
Rad50P70388 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rad50P70388 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rad50P70388 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rad50P70388 Gm44450-201ENSMUST00000199528 114 ntBASIC19.79■□□□□ 0.76
Rad50P70388 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rad50P70388 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rad50P70388 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rad50P70388 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rad50P70388 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Rad50P70388 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Rad50P70388 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Rad50P70388 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rad50P70388 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rad50P70388 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rad50P70388 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.79■□□□□ 0.76
Rad50P70388 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Rad50P70388 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rad50P70388 Gm26039-201ENSMUST00000158152 144 ntBASIC19.78■□□□□ 0.76
Rad50P70388 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.78■□□□□ 0.76
Rad50P70388 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.78■□□□□ 0.76
Rad50P70388 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rad50P70388 Gm17808-201ENSMUST00000200859 894 ntBASIC19.78■□□□□ 0.76
Rad50P70388 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.78■□□□□ 0.76
Rad50P70388 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rad50P70388 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rad50P70388 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rad50P70388 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rad50P70388 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Rad50P70388 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.78■□□□□ 0.76
Rad50P70388 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Rad50P70388 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.78■□□□□ 0.76
Rad50P70388 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rad50P70388 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rad50P70388 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rad50P70388 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rad50P70388 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rad50P70388 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rad50P70388 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rad50P70388 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rad50P70388 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rad50P70388 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rad50P70388 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rad50P70388 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rad50P70388 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rad50P70388 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rad50P70388 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.77■□□□□ 0.76
Rad50P70388 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.77■□□□□ 0.76
Rad50P70388 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Rad50P70388 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rad50P70388 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
Rad50P70388 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rad50P70388 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.77■□□□□ 0.76
Rad50P70388 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rad50P70388 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rad50P70388 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rad50P70388 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Rad50P70388 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.76
Rad50P70388 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Rad50P70388 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Rad50P70388 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rad50P70388 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Rad50P70388 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rad50P70388 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rad50P70388 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rad50P70388 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rad50P70388 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rad50P70388 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms