Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.41■□□□□ 0.7
Lrch1P62046 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lrch1P62046 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrch1P62046 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrch1P62046 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrch1P62046 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.41■□□□□ 0.7
Lrch1P62046 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.41■□□□□ 0.7
Lrch1P62046 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC19.41■□□□□ 0.7
Lrch1P62046 Gm9172-201ENSMUST00000212092 954 ntBASIC19.41■□□□□ 0.7
Lrch1P62046 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrch1P62046 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC19.41■□□□□ 0.7
Lrch1P62046 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrch1P62046 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrch1P62046 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrch1P62046 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC19.41■□□□□ 0.7
Lrch1P62046 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrch1P62046 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrch1P62046 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrch1P62046 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrch1P62046 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrch1P62046 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Lrch1P62046 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lrch1P62046 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lrch1P62046 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lrch1P62046 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.4■□□□□ 0.7
Lrch1P62046 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lrch1P62046 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.4■□□□□ 0.7
Lrch1P62046 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lrch1P62046 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC19.4■□□□□ 0.7
Lrch1P62046 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC19.4■□□□□ 0.7
Lrch1P62046 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC19.4■□□□□ 0.7
Lrch1P62046 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lrch1P62046 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lrch1P62046 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Lrch1P62046 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lrch1P62046 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Lrch1P62046 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Lrch1P62046 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lrch1P62046 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.39■□□□□ 0.69
Lrch1P62046 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lrch1P62046 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC19.39■□□□□ 0.69
Lrch1P62046 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC19.39■□□□□ 0.69
Lrch1P62046 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lrch1P62046 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Lrch1P62046 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lrch1P62046 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lrch1P62046 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lrch1P62046 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lrch1P62046 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lrch1P62046 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.39■□□□□ 0.69
Lrch1P62046 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lrch1P62046 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lrch1P62046 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrch1P62046 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrch1P62046 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrch1P62046 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Lrch1P62046 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC19.38■□□□□ 0.69
Lrch1P62046 Gm44872-201ENSMUST00000207864 420 ntBASIC19.38■□□□□ 0.69
Lrch1P62046 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.38■□□□□ 0.69
Lrch1P62046 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrch1P62046 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Lrch1P62046 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrch1P62046 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrch1P62046 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrch1P62046 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.38■□□□□ 0.69
Lrch1P62046 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrch1P62046 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lrch1P62046 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrch1P62046 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrch1P62046 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Lrch1P62046 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.37■□□□□ 0.69
Lrch1P62046 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrch1P62046 Gm11873-201ENSMUST00000117877 1304 ntBASIC19.37■□□□□ 0.69
Lrch1P62046 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.37■□□□□ 0.69
Lrch1P62046 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Lrch1P62046 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC19.37■□□□□ 0.69
Lrch1P62046 Gm11025-201ENSMUST00000140773 466 ntBASIC19.37■□□□□ 0.69
Lrch1P62046 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lrch1P62046 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lrch1P62046 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC19.37■□□□□ 0.69
Lrch1P62046 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrch1P62046 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrch1P62046 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrch1P62046 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrch1P62046 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.37■□□□□ 0.69
Lrch1P62046 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lrch1P62046 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lrch1P62046 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lrch1P62046 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Lrch1P62046 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.36■□□□□ 0.69
Lrch1P62046 Gm14701-201ENSMUST00000117156 348 ntBASIC19.36■□□□□ 0.69
Lrch1P62046 Gm11764-201ENSMUST00000120221 623 ntBASIC19.36■□□□□ 0.69
Lrch1P62046 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC19.36■□□□□ 0.69
Lrch1P62046 Gm44945-201ENSMUST00000206764 1187 ntBASIC19.36■□□□□ 0.69
Lrch1P62046 AC159114.1-201ENSMUST00000220349 266 ntBASIC19.36■□□□□ 0.69
Lrch1P62046 AC159106.1-201ENSMUST00000224421 690 ntBASIC19.36■□□□□ 0.69
Lrch1P62046 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lrch1P62046 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lrch1P62046 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lrch1P62046 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms