Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rrp1P56183 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.62■□□□□ 0.57
Rrp1P56183 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rrp1P56183 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rrp1P56183 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rrp1P56183 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Rrp1P56183 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.62■□□□□ 0.57
Rrp1P56183 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rrp1P56183 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rrp1P56183 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rrp1P56183 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rrp1P56183 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rrp1P56183 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rrp1P56183 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rrp1P56183 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rrp1P56183 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.61■□□□□ 0.57
Rrp1P56183 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rrp1P56183 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.61■□□□□ 0.57
Rrp1P56183 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.61■□□□□ 0.57
Rrp1P56183 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rrp1P56183 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.61■□□□□ 0.57
Rrp1P56183 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rrp1P56183 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.61■□□□□ 0.57
Rrp1P56183 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.61■□□□□ 0.57
Rrp1P56183 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rrp1P56183 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Rrp1P56183 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rrp1P56183 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rrp1P56183 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rrp1P56183 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rrp1P56183 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Rrp1P56183 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rrp1P56183 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.6■□□□□ 0.57
Rrp1P56183 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rrp1P56183 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rrp1P56183 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rrp1P56183 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rrp1P56183 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rrp1P56183 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.6■□□□□ 0.57
Rrp1P56183 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Rrp1P56183 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.6■□□□□ 0.57
Rrp1P56183 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rrp1P56183 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.6■□□□□ 0.57
Rrp1P56183 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.6■□□□□ 0.57
Rrp1P56183 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rrp1P56183 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Rrp1P56183 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rrp1P56183 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rrp1P56183 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rrp1P56183 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rrp1P56183 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rrp1P56183 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rrp1P56183 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rrp1P56183 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rrp1P56183 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rrp1P56183 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rrp1P56183 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rrp1P56183 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rrp1P56183 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rrp1P56183 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rrp1P56183 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rrp1P56183 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rrp1P56183 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rrp1P56183 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rrp1P56183 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rrp1P56183 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
Rrp1P56183 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rrp1P56183 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rrp1P56183 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Rrp1P56183 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rrp1P56183 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.58■□□□□ 0.57
Rrp1P56183 Mir1199-201ENSMUST00000117015 119 ntBASIC18.58■□□□□ 0.56
Rrp1P56183 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.58■□□□□ 0.56
Rrp1P56183 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.58■□□□□ 0.56
Rrp1P56183 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.58■□□□□ 0.56
Rrp1P56183 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.58■□□□□ 0.56
Rrp1P56183 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rrp1P56183 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rrp1P56183 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rrp1P56183 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rrp1P56183 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rrp1P56183 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rrp1P56183 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rrp1P56183 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rrp1P56183 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rrp1P56183 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Rrp1P56183 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rrp1P56183 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rrp1P56183 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rrp1P56183 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Rrp1P56183 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rrp1P56183 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.57■□□□□ 0.56
Rrp1P56183 Timm23-208ENSMUST00000226683 750 ntBASIC18.57■□□□□ 0.56
Rrp1P56183 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rrp1P56183 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rrp1P56183 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rrp1P56183 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Rrp1P56183 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rrp1P56183 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rrp1P56183 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms