Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdkn2bP55271 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Cdkn2bP55271 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cdkn2bP55271 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdkn2bP55271 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdkn2bP55271 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Cdkn2bP55271 Actl10-202ENSMUST00000226583 1501 ntBASIC15.82■□□□□ 0.12
Cdkn2bP55271 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cdkn2bP55271 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdkn2bP55271 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdkn2bP55271 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdkn2bP55271 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Cdkn2bP55271 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdkn2bP55271 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.81■□□□□ 0.12
Cdkn2bP55271 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.81■□□□□ 0.12
Cdkn2bP55271 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdkn2bP55271 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdkn2bP55271 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Cdkn2bP55271 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdkn2bP55271 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdkn2bP55271 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdkn2bP55271 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Cdkn2bP55271 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cdkn2bP55271 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdkn2bP55271 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdkn2bP55271 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdkn2bP55271 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdkn2bP55271 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cdkn2bP55271 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdkn2bP55271 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cdkn2bP55271 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdkn2bP55271 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.81■□□□□ 0.12
Cdkn2bP55271 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdkn2bP55271 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cdkn2bP55271 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdkn2bP55271 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdkn2bP55271 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdkn2bP55271 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdkn2bP55271 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdkn2bP55271 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdkn2bP55271 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdkn2bP55271 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdkn2bP55271 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdkn2bP55271 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdkn2bP55271 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cdkn2bP55271 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdkn2bP55271 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdkn2bP55271 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdkn2bP55271 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cdkn2bP55271 Gm13186-201ENSMUST00000118031 316 ntBASIC15.8■□□□□ 0.12
Cdkn2bP55271 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.8■□□□□ 0.12
Cdkn2bP55271 Slc35b2-207ENSMUST00000226086 850 ntBASIC15.8■□□□□ 0.12
Cdkn2bP55271 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Cdkn2bP55271 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Cdkn2bP55271 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Cdkn2bP55271 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdkn2bP55271 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdkn2bP55271 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdkn2bP55271 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cdkn2bP55271 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdkn2bP55271 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cdkn2bP55271 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdkn2bP55271 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdkn2bP55271 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Cdkn2bP55271 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cdkn2bP55271 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cdkn2bP55271 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdkn2bP55271 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdkn2bP55271 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdkn2bP55271 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cdkn2bP55271 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Cdkn2bP55271 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdkn2bP55271 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Cdkn2bP55271 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdkn2bP55271 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.79■□□□□ 0.12
Cdkn2bP55271 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdkn2bP55271 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Cdkn2bP55271 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cdkn2bP55271 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdkn2bP55271 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdkn2bP55271 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Cdkn2bP55271 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdkn2bP55271 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdkn2bP55271 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdkn2bP55271 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cdkn2bP55271 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdkn2bP55271 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.79■□□□□ 0.12
Cdkn2bP55271 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cdkn2bP55271 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.78■□□□□ 0.12
Cdkn2bP55271 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdkn2bP55271 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdkn2bP55271 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cdkn2bP55271 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdkn2bP55271 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cdkn2bP55271 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cdkn2bP55271 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdkn2bP55271 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdkn2bP55271 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdkn2bP55271 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdkn2bP55271 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms