Protein–RNA interactions for Protein: P54754

Ephb3, Ephrin type-B receptor 3, mousemouse

Known RBP Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ephb3P54754 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.28■□□□□ 0.36
Ephb3P54754 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.28■□□□□ 0.36
Ephb3P54754 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Ephb3P54754 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.28■□□□□ 0.36
Ephb3P54754 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.28■□□□□ 0.36
Ephb3P54754 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ephb3P54754 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ephb3P54754 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Ephb3P54754 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ephb3P54754 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Ephb3P54754 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Ephb3P54754 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.27■□□□□ 0.36
Ephb3P54754 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.27■□□□□ 0.36
Ephb3P54754 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.27■□□□□ 0.36
Ephb3P54754 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.27■□□□□ 0.36
Ephb3P54754 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.27■□□□□ 0.36
Ephb3P54754 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.27■□□□□ 0.36
Ephb3P54754 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ephb3P54754 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ephb3P54754 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ephb3P54754 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ephb3P54754 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ephb3P54754 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ephb3P54754 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.35
Ephb3P54754 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Ephb3P54754 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ephb3P54754 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ephb3P54754 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ephb3P54754 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ephb3P54754 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ephb3P54754 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ephb3P54754 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ephb3P54754 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Ephb3P54754 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ephb3P54754 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.26■□□□□ 0.35
Ephb3P54754 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.26■□□□□ 0.35
Ephb3P54754 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Ephb3P54754 Gm27628-201ENSMUST00000184911 107 ntBASIC17.26■□□□□ 0.35
Ephb3P54754 Gm6550-201ENSMUST00000187574 993 ntBASIC17.26■□□□□ 0.35
Ephb3P54754 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.26■□□□□ 0.35
Ephb3P54754 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ephb3P54754 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.26■□□□□ 0.35
Ephb3P54754 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ephb3P54754 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ephb3P54754 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ephb3P54754 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ephb3P54754 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ephb3P54754 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ephb3P54754 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ephb3P54754 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ephb3P54754 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ephb3P54754 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ephb3P54754 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Ephb3P54754 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ephb3P54754 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ephb3P54754 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ephb3P54754 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ephb3P54754 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ephb3P54754 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ephb3P54754 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.25■□□□□ 0.35
Ephb3P54754 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.25■□□□□ 0.35
Ephb3P54754 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.25■□□□□ 0.35
Ephb3P54754 Gm9727-201ENSMUST00000161387 555 ntBASIC17.25■□□□□ 0.35
Ephb3P54754 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ephb3P54754 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ephb3P54754 Gm6089-201ENSMUST00000197666 938 ntBASIC17.25■□□□□ 0.35
Ephb3P54754 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.25■□□□□ 0.35
Ephb3P54754 AV026068-213ENSMUST00000223675 1171 ntBASIC17.25■□□□□ 0.35
Ephb3P54754 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ephb3P54754 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ephb3P54754 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Ephb3P54754 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.25■□□□□ 0.35
Ephb3P54754 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ephb3P54754 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ephb3P54754 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ephb3P54754 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ephb3P54754 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ephb3P54754 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Ephb3P54754 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ephb3P54754 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.24■□□□□ 0.35
Ephb3P54754 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ephb3P54754 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ephb3P54754 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.24■□□□□ 0.35
Ephb3P54754 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.24■□□□□ 0.35
Ephb3P54754 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.24■□□□□ 0.35
Ephb3P54754 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ephb3P54754 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ephb3P54754 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ephb3P54754 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ephb3P54754 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ephb3P54754 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ephb3P54754 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ephb3P54754 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Ephb3P54754 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ephb3P54754 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ephb3P54754 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.24■□□□□ 0.35
Ephb3P54754 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ephb3P54754 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Ephb3P54754 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ephb3P54754 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms