Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nub1P54729 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nub1P54729 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nub1P54729 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nub1P54729 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nub1P54729 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.75■□□□□ 0.43
Nub1P54729 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.75■□□□□ 0.43
Nub1P54729 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.75■□□□□ 0.43
Nub1P54729 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nub1P54729 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nub1P54729 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.75■□□□□ 0.43
Nub1P54729 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nub1P54729 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nub1P54729 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.75■□□□□ 0.43
Nub1P54729 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nub1P54729 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nub1P54729 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nub1P54729 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nub1P54729 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nub1P54729 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nub1P54729 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nub1P54729 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nub1P54729 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.75■□□□□ 0.43
Nub1P54729 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nub1P54729 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nub1P54729 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Nub1P54729 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nub1P54729 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Nub1P54729 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nub1P54729 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nub1P54729 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Nub1P54729 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nub1P54729 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Nub1P54729 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nub1P54729 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nub1P54729 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nub1P54729 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Nub1P54729 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Nub1P54729 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Nub1P54729 Gm6659-201ENSMUST00000174752 547 ntBASIC17.74■□□□□ 0.43
Nub1P54729 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Nub1P54729 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nub1P54729 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nub1P54729 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.74■□□□□ 0.43
Nub1P54729 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nub1P54729 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.74■□□□□ 0.43
Nub1P54729 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nub1P54729 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nub1P54729 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Nub1P54729 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Nub1P54729 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Nub1P54729 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nub1P54729 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nub1P54729 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nub1P54729 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nub1P54729 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nub1P54729 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Nub1P54729 Gm11355-201ENSMUST00000121120 306 ntBASIC17.73■□□□□ 0.43
Nub1P54729 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nub1P54729 Gm37722-201ENSMUST00000193757 208 ntBASIC17.73■□□□□ 0.43
Nub1P54729 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nub1P54729 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nub1P54729 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nub1P54729 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nub1P54729 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nub1P54729 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nub1P54729 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nub1P54729 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Nub1P54729 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nub1P54729 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nub1P54729 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nub1P54729 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nub1P54729 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nub1P54729 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nub1P54729 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nub1P54729 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.72■□□□□ 0.43
Nub1P54729 Gm13216-201ENSMUST00000117145 591 ntBASIC17.72■□□□□ 0.43
Nub1P54729 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nub1P54729 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Nub1P54729 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.72■□□□□ 0.43
Nub1P54729 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nub1P54729 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nub1P54729 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nub1P54729 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nub1P54729 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nub1P54729 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.72■□□□□ 0.43
Nub1P54729 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nub1P54729 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nub1P54729 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nub1P54729 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nub1P54729 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nub1P54729 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nub1P54729 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nub1P54729 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.71■□□□□ 0.43
Nub1P54729 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Nub1P54729 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.71■□□□□ 0.43
Nub1P54729 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Nub1P54729 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.71■□□□□ 0.43
Nub1P54729 Gm18421-201ENSMUST00000204122 625 ntBASIC17.71■□□□□ 0.43
Nub1P54729 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms