Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC20.86■□□□□ 0.93
Msh6P54276 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC20.86■□□□□ 0.93
Msh6P54276 AC159093.1-201ENSMUST00000227779 380 ntBASIC20.86■□□□□ 0.93
Msh6P54276 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Msh6P54276 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Msh6P54276 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Msh6P54276 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Msh6P54276 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Msh6P54276 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Msh6P54276 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Msh6P54276 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Msh6P54276 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Msh6P54276 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Msh6P54276 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Msh6P54276 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Msh6P54276 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Msh6P54276 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC20.85■□□□□ 0.93
Msh6P54276 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Msh6P54276 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Msh6P54276 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC20.85■□□□□ 0.93
Msh6P54276 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
Msh6P54276 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC20.85■□□□□ 0.93
Msh6P54276 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Msh6P54276 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Msh6P54276 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Msh6P54276 Gm9889-202ENSMUST00000206983 1577 ntBASIC20.85■□□□□ 0.93
Msh6P54276 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Msh6P54276 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Msh6P54276 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Msh6P54276 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Msh6P54276 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Msh6P54276 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Msh6P54276 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Msh6P54276 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC20.85■□□□□ 0.93
Msh6P54276 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Msh6P54276 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Msh6P54276 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Msh6P54276 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC20.84■□□□□ 0.93
Msh6P54276 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Msh6P54276 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Msh6P54276 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Msh6P54276 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Msh6P54276 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Msh6P54276 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC20.84■□□□□ 0.93
Msh6P54276 Gm15467-201ENSMUST00000120582 445 ntBASIC20.84■□□□□ 0.93
Msh6P54276 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Msh6P54276 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Msh6P54276 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC20.84■□□□□ 0.93
Msh6P54276 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Msh6P54276 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Msh6P54276 Gm2213-201ENSMUST00000197485 688 ntBASIC20.84■□□□□ 0.93
Msh6P54276 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
Msh6P54276 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC20.84■□□□□ 0.93
Msh6P54276 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Msh6P54276 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Msh6P54276 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Msh6P54276 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Msh6P54276 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Msh6P54276 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Msh6P54276 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Msh6P54276 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Msh6P54276 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Msh6P54276 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Msh6P54276 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Msh6P54276 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Msh6P54276 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
Msh6P54276 Gm27702-201ENSMUST00000184512 56 ntBASIC20.83■□□□□ 0.92
Msh6P54276 Gm42670-201ENSMUST00000201816 1292 ntBASIC20.83■□□□□ 0.92
Msh6P54276 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC20.83■□□□□ 0.92
Msh6P54276 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Msh6P54276 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Msh6P54276 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Msh6P54276 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Msh6P54276 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Msh6P54276 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Msh6P54276 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Msh6P54276 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Msh6P54276 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Msh6P54276 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Msh6P54276 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Msh6P54276 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Msh6P54276 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Msh6P54276 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Msh6P54276 Gm4535-201ENSMUST00000182274 558 ntBASIC20.82■□□□□ 0.92
Msh6P54276 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Msh6P54276 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Msh6P54276 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Msh6P54276 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Msh6P54276 Gm10355-201ENSMUST00000097146 517 ntBASIC20.82■□□□□ 0.92
Msh6P54276 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Msh6P54276 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Msh6P54276 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Msh6P54276 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Msh6P54276 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Msh6P54276 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Msh6P54276 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Msh6P54276 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Msh6P54276 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Msh6P54276 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Msh6P54276 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms