Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.33■□□□□ 0.2
Pdx1P52946 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pdx1P52946 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pdx1P52946 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.33■□□□□ 0.2
Pdx1P52946 Gm29707-201ENSMUST00000196325 491 ntBASIC16.33■□□□□ 0.2
Pdx1P52946 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pdx1P52946 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pdx1P52946 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pdx1P52946 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pdx1P52946 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pdx1P52946 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pdx1P52946 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Pdx1P52946 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Pdx1P52946 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.33■□□□□ 0.2
Pdx1P52946 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pdx1P52946 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pdx1P52946 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pdx1P52946 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pdx1P52946 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Pdx1P52946 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.33■□□□□ 0.2
Pdx1P52946 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pdx1P52946 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Pdx1P52946 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pdx1P52946 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdx1P52946 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdx1P52946 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdx1P52946 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdx1P52946 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdx1P52946 Haglr-201ENSMUST00000100000 2085 ntBASIC16.32■□□□□ 0.2
Pdx1P52946 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Pdx1P52946 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pdx1P52946 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdx1P52946 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pdx1P52946 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Pdx1P52946 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdx1P52946 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.32■□□□□ 0.2
Pdx1P52946 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Pdx1P52946 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Pdx1P52946 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.32■□□□□ 0.2
Pdx1P52946 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.32■□□□□ 0.2
Pdx1P52946 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdx1P52946 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdx1P52946 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdx1P52946 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdx1P52946 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdx1P52946 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Pdx1P52946 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Pdx1P52946 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdx1P52946 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pdx1P52946 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pdx1P52946 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.31■□□□□ 0.2
Pdx1P52946 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdx1P52946 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.31■□□□□ 0.2
Pdx1P52946 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Pdx1P52946 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pdx1P52946 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdx1P52946 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdx1P52946 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pdx1P52946 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.31■□□□□ 0.2
Pdx1P52946 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pdx1P52946 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.31■□□□□ 0.2
Pdx1P52946 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdx1P52946 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pdx1P52946 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pdx1P52946 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.31■□□□□ 0.2
Pdx1P52946 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pdx1P52946 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
Pdx1P52946 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pdx1P52946 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdx1P52946 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pdx1P52946 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.3■□□□□ 0.2
Pdx1P52946 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdx1P52946 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pdx1P52946 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdx1P52946 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pdx1P52946 Mir770-201ENSMUST00000103252 94 ntBASIC16.3■□□□□ 0.2
Pdx1P52946 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdx1P52946 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pdx1P52946 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.3■□□□□ 0.2
Pdx1P52946 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.3■□□□□ 0.2
Pdx1P52946 Gm6345-202ENSMUST00000180900 204 ntBASIC16.3■□□□□ 0.2
Pdx1P52946 Gm5587-201ENSMUST00000206270 674 ntBASIC16.3■□□□□ 0.2
Pdx1P52946 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Pdx1P52946 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdx1P52946 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pdx1P52946 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdx1P52946 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pdx1P52946 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdx1P52946 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdx1P52946 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pdx1P52946 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdx1P52946 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdx1P52946 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdx1P52946 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pdx1P52946 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdx1P52946 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdx1P52946 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdx1P52946 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdx1P52946 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdx1P52946 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms