Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps4bP46467 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps4bP46467 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps4bP46467 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps4bP46467 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps4bP46467 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps4bP46467 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Vps4bP46467 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps4bP46467 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.75■□□□□ 0.27
Vps4bP46467 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.75■□□□□ 0.27
Vps4bP46467 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps4bP46467 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps4bP46467 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.75■□□□□ 0.27
Vps4bP46467 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps4bP46467 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps4bP46467 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps4bP46467 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps4bP46467 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps4bP46467 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.74■□□□□ 0.27
Vps4bP46467 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps4bP46467 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps4bP46467 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps4bP46467 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps4bP46467 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps4bP46467 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vps4bP46467 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps4bP46467 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
Vps4bP46467 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vps4bP46467 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps4bP46467 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps4bP46467 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps4bP46467 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps4bP46467 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Vps4bP46467 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.73■□□□□ 0.27
Vps4bP46467 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Vps4bP46467 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Vps4bP46467 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps4bP46467 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.73■□□□□ 0.27
Vps4bP46467 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps4bP46467 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Vps4bP46467 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps4bP46467 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.73■□□□□ 0.27
Vps4bP46467 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Vps4bP46467 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps4bP46467 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Vps4bP46467 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps4bP46467 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps4bP46467 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Vps4bP46467 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps4bP46467 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Vps4bP46467 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps4bP46467 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.73■□□□□ 0.27
Vps4bP46467 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Vps4bP46467 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps4bP46467 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps4bP46467 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Vps4bP46467 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps4bP46467 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps4bP46467 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
Vps4bP46467 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vps4bP46467 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps4bP46467 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Vps4bP46467 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vps4bP46467 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.72■□□□□ 0.27
Vps4bP46467 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.72■□□□□ 0.27
Vps4bP46467 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.72■□□□□ 0.27
Vps4bP46467 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Vps4bP46467 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps4bP46467 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.72■□□□□ 0.27
Vps4bP46467 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vps4bP46467 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Vps4bP46467 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps4bP46467 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vps4bP46467 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Vps4bP46467 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps4bP46467 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps4bP46467 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps4bP46467 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps4bP46467 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps4bP46467 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.71■□□□□ 0.27
Vps4bP46467 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps4bP46467 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps4bP46467 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
Vps4bP46467 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps4bP46467 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Vps4bP46467 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.71■□□□□ 0.27
Vps4bP46467 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Vps4bP46467 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps4bP46467 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps4bP46467 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps4bP46467 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Vps4bP46467 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Vps4bP46467 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Vps4bP46467 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps4bP46467 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps4bP46467 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.71■□□□□ 0.27
Vps4bP46467 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps4bP46467 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps4bP46467 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Vps4bP46467 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms