Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.65■□□□□ 0.1
Cdx2P43241 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdx2P43241 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
Cdx2P43241 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.65■□□□□ 0.1
Cdx2P43241 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.65■□□□□ 0.1
Cdx2P43241 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdx2P43241 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdx2P43241 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdx2P43241 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cdx2P43241 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdx2P43241 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdx2P43241 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdx2P43241 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdx2P43241 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.64■□□□□ 0.1
Cdx2P43241 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Cdx2P43241 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdx2P43241 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cdx2P43241 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdx2P43241 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.64■□□□□ 0.09
Cdx2P43241 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Cdx2P43241 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Cdx2P43241 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdx2P43241 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdx2P43241 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdx2P43241 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Cdx2P43241 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.64■□□□□ 0.09
Cdx2P43241 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Cdx2P43241 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.64■□□□□ 0.09
Cdx2P43241 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdx2P43241 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cdx2P43241 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.64■□□□□ 0.09
Cdx2P43241 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cdx2P43241 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cdx2P43241 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cdx2P43241 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdx2P43241 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdx2P43241 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.63■□□□□ 0.09
Cdx2P43241 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdx2P43241 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.63■□□□□ 0.09
Cdx2P43241 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.63■□□□□ 0.09
Cdx2P43241 Gm6736-201ENSMUST00000166583 948 ntBASIC15.63■□□□□ 0.09
Cdx2P43241 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Cdx2P43241 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Cdx2P43241 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdx2P43241 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cdx2P43241 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdx2P43241 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.63■□□□□ 0.09
Cdx2P43241 AV026068-213ENSMUST00000223675 1171 ntBASIC15.63■□□□□ 0.09
Cdx2P43241 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.63■□□□□ 0.09
Cdx2P43241 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdx2P43241 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cdx2P43241 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdx2P43241 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.63■□□□□ 0.09
Cdx2P43241 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.63■□□□□ 0.09
Cdx2P43241 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.63■□□□□ 0.09
Cdx2P43241 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdx2P43241 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Cdx2P43241 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdx2P43241 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cdx2P43241 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdx2P43241 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdx2P43241 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdx2P43241 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdx2P43241 Gm8097-201ENSMUST00000117903 829 ntBASIC15.62■□□□□ 0.09
Cdx2P43241 Gm4459-201ENSMUST00000118750 468 ntBASIC15.62■□□□□ 0.09
Cdx2P43241 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.62■□□□□ 0.09
Cdx2P43241 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.62■□□□□ 0.09
Cdx2P43241 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdx2P43241 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.62■□□□□ 0.09
Cdx2P43241 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cdx2P43241 Gm6550-201ENSMUST00000187574 993 ntBASIC15.62■□□□□ 0.09
Cdx2P43241 Gm43575-201ENSMUST00000196420 516 ntBASIC15.62■□□□□ 0.09
Cdx2P43241 Gm6089-201ENSMUST00000197666 938 ntBASIC15.62■□□□□ 0.09
Cdx2P43241 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdx2P43241 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdx2P43241 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdx2P43241 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.62■□□□□ 0.09
Cdx2P43241 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.62■□□□□ 0.09
Cdx2P43241 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cdx2P43241 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.62■□□□□ 0.09
Cdx2P43241 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdx2P43241 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Cdx2P43241 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
Cdx2P43241 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Cdx2P43241 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdx2P43241 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Cdx2P43241 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cdx2P43241 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdx2P43241 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Cdx2P43241 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdx2P43241 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Cdx2P43241 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.61■□□□□ 0.09
Cdx2P43241 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.61■□□□□ 0.09
Cdx2P43241 Gm12497-201ENSMUST00000138778 237 ntBASIC15.61■□□□□ 0.09
Cdx2P43241 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.61■□□□□ 0.09
Cdx2P43241 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cdx2P43241 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.61■□□□□ 0.09
Cdx2P43241 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.61■□□□□ 0.09
Cdx2P43241 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdx2P43241 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms