Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
HttP42859 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC17.57■□□□□ 0.4
HttP42859 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HttP42859 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.57■□□□□ 0.4
HttP42859 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HttP42859 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HttP42859 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.57■□□□□ 0.4
HttP42859 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HttP42859 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HttP42859 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HttP42859 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
HttP42859 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HttP42859 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HttP42859 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HttP42859 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HttP42859 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HttP42859 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HttP42859 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HttP42859 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HttP42859 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HttP42859 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HttP42859 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HttP42859 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HttP42859 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HttP42859 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HttP42859 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.56■□□□□ 0.4
HttP42859 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HttP42859 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HttP42859 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HttP42859 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HttP42859 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HttP42859 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HttP42859 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HttP42859 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
HttP42859 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
HttP42859 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
HttP42859 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HttP42859 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HttP42859 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HttP42859 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
HttP42859 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
HttP42859 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
HttP42859 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
HttP42859 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HttP42859 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HttP42859 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HttP42859 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HttP42859 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.55■□□□□ 0.4
HttP42859 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HttP42859 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HttP42859 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HttP42859 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HttP42859 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HttP42859 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HttP42859 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HttP42859 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HttP42859 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HttP42859 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HttP42859 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HttP42859 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HttP42859 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HttP42859 Gm18889-201ENSMUST00000174284 929 ntBASIC17.54■□□□□ 0.4
HttP42859 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HttP42859 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
HttP42859 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HttP42859 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HttP42859 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.54■□□□□ 0.4
HttP42859 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HttP42859 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.54■□□□□ 0.4
HttP42859 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HttP42859 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HttP42859 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.54■□□□□ 0.4
HttP42859 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HttP42859 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HttP42859 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.54■□□□□ 0.4
HttP42859 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.54■□□□□ 0.4
HttP42859 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HttP42859 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.54■□□□□ 0.4
HttP42859 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HttP42859 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HttP42859 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HttP42859 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC17.53■□□□□ 0.4
HttP42859 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HttP42859 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.53■□□□□ 0.4
HttP42859 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HttP42859 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HttP42859 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HttP42859 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HttP42859 Gm17271-201ENSMUST00000165535 355 ntBASIC17.53■□□□□ 0.4
HttP42859 Gm22175-201ENSMUST00000175007 78 ntBASIC17.53■□□□□ 0.4
HttP42859 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HttP42859 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
HttP42859 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HttP42859 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HttP42859 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HttP42859 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
HttP42859 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HttP42859 Mir449b-201ENSMUST00000104833 80 ntBASIC17.52■□□□□ 0.4
HttP42859 Gm11745-201ENSMUST00000121669 448 ntBASIC17.52■□□□□ 0.4
HttP42859 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms