Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.15■□□□□ 0.02
Nkx2-2P42586 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-2P42586 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Nkx2-2P42586 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-2P42586 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.15■□□□□ 0.02
Nkx2-2P42586 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-2P42586 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-2P42586 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-2P42586 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-2P42586 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-2P42586 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-2P42586 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.15■□□□□ 0.02
Nkx2-2P42586 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Nkx2-2P42586 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-2P42586 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-2P42586 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-2P42586 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.14■□□□□ 0.01
Nkx2-2P42586 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-2P42586 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Nkx2-2P42586 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.14■□□□□ 0.01
Nkx2-2P42586 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-2P42586 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Nkx2-2P42586 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.14■□□□□ 0.01
Nkx2-2P42586 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.14■□□□□ 0.01
Nkx2-2P42586 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-2P42586 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-2P42586 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-2P42586 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Nkx2-2P42586 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-2P42586 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Nkx2-2P42586 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Nkx2-2P42586 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-2P42586 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-2P42586 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.14■□□□□ 0.01
Nkx2-2P42586 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.14■□□□□ 0.01
Nkx2-2P42586 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.14■□□□□ 0.01
Nkx2-2P42586 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-2P42586 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Nkx2-2P42586 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-2P42586 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.14■□□□□ 0.01
Nkx2-2P42586 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-2P42586 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Nkx2-2P42586 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-2P42586 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-2P42586 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-2P42586 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Nkx2-2P42586 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-2P42586 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.13■□□□□ 0.01
Nkx2-2P42586 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-2P42586 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.13■□□□□ 0.01
Nkx2-2P42586 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Nkx2-2P42586 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-2P42586 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-2P42586 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-2P42586 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-2P42586 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-2P42586 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-2P42586 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-2P42586 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Nkx2-2P42586 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-2P42586 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-2P42586 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.12■□□□□ 0.01
Nkx2-2P42586 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Nkx2-2P42586 Gm9013-201ENSMUST00000132939 882 ntBASIC15.12■□□□□ 0.01
Nkx2-2P42586 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.12■□□□□ 0.01
Nkx2-2P42586 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.12■□□□□ 0.01
Nkx2-2P42586 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-2P42586 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-2P42586 Gm36967-201ENSMUST00000193814 266 ntBASIC15.12■□□□□ 0.01
Nkx2-2P42586 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.12■□□□□ 0.01
Nkx2-2P42586 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-2P42586 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-2P42586 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-2P42586 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-2P42586 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Nkx2-2P42586 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-2P42586 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-2P42586 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.12■□□□□ 0.01
Nkx2-2P42586 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-2P42586 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-2P42586 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-2P42586 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-2P42586 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-2P42586 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-2P42586 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Nkx2-2P42586 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-2P42586 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-2P42586 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-2P42586 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-2P42586 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-2P42586 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-2P42586 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.11■□□□□ 0.01
Nkx2-2P42586 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-2P42586 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-2P42586 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Nkx2-2P42586 Gm13836-201ENSMUST00000121159 501 ntBASIC15.11■□□□□ 0.01
Nkx2-2P42586 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.11■□□□□ 0.01
Nkx2-2P42586 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.11■□□□□ 0.01
Nkx2-2P42586 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-2P42586 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms