Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cxcl12P40224 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Cxcl12P40224 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Cxcl12P40224 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cxcl12P40224 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cxcl12P40224 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cxcl12P40224 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cxcl12P40224 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cxcl12P40224 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cxcl12P40224 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.99■□□□□ 0.31
Cxcl12P40224 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.99■□□□□ 0.31
Cxcl12P40224 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.99■□□□□ 0.31
Cxcl12P40224 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.99■□□□□ 0.31
Cxcl12P40224 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Cxcl12P40224 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.99■□□□□ 0.31
Cxcl12P40224 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cxcl12P40224 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.98■□□□□ 0.31
Cxcl12P40224 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cxcl12P40224 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cxcl12P40224 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cxcl12P40224 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Cxcl12P40224 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cxcl12P40224 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cxcl12P40224 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Cxcl12P40224 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Cxcl12P40224 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cxcl12P40224 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cxcl12P40224 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Cxcl12P40224 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cxcl12P40224 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cxcl12P40224 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cxcl12P40224 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cxcl12P40224 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.98■□□□□ 0.31
Cxcl12P40224 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cxcl12P40224 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.97■□□□□ 0.31
Cxcl12P40224 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cxcl12P40224 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Cxcl12P40224 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.97■□□□□ 0.31
Cxcl12P40224 Gm17271-201ENSMUST00000165535 355 ntBASIC16.97■□□□□ 0.31
Cxcl12P40224 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.97■□□□□ 0.31
Cxcl12P40224 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cxcl12P40224 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cxcl12P40224 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.97■□□□□ 0.31
Cxcl12P40224 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cxcl12P40224 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cxcl12P40224 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cxcl12P40224 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cxcl12P40224 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.97■□□□□ 0.31
Cxcl12P40224 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Cxcl12P40224 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cxcl12P40224 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cxcl12P40224 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cxcl12P40224 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cxcl12P40224 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cxcl12P40224 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Cxcl12P40224 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cxcl12P40224 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
Cxcl12P40224 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cxcl12P40224 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cxcl12P40224 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cxcl12P40224 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cxcl12P40224 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.96■□□□□ 0.31
Cxcl12P40224 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Cxcl12P40224 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cxcl12P40224 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.96■□□□□ 0.31
Cxcl12P40224 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cxcl12P40224 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cxcl12P40224 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cxcl12P40224 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.96■□□□□ 0.3
Cxcl12P40224 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cxcl12P40224 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Cxcl12P40224 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cxcl12P40224 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cxcl12P40224 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cxcl12P40224 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.95■□□□□ 0.3
Cxcl12P40224 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cxcl12P40224 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cxcl12P40224 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.95■□□□□ 0.3
Cxcl12P40224 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.95■□□□□ 0.3
Cxcl12P40224 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cxcl12P40224 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cxcl12P40224 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cxcl12P40224 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Cxcl12P40224 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cxcl12P40224 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cxcl12P40224 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cxcl12P40224 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cxcl12P40224 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cxcl12P40224 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cxcl12P40224 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cxcl12P40224 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.95■□□□□ 0.3
Cxcl12P40224 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Cxcl12P40224 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cxcl12P40224 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cxcl12P40224 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cxcl12P40224 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.94■□□□□ 0.3
Cxcl12P40224 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.94■□□□□ 0.3
Cxcl12P40224 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cxcl12P40224 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cxcl12P40224 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms