Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a1P31648 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a1P31648 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a1P31648 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a1P31648 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Slc6a1P31648 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a1P31648 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a1P31648 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a1P31648 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.24□□□□□ -0.13
Slc6a1P31648 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a1P31648 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a1P31648 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a1P31648 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Slc6a1P31648 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a1P31648 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a1P31648 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a1P31648 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a1P31648 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a1P31648 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a1P31648 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Slc6a1P31648 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Slc6a1P31648 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a1P31648 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a1P31648 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Slc6a1P31648 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.24□□□□□ -0.13
Slc6a1P31648 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a1P31648 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a1P31648 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a1P31648 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.24□□□□□ -0.13
Slc6a1P31648 Gm2559-201ENSMUST00000201323 363 ntBASIC14.24□□□□□ -0.13
Slc6a1P31648 Gm44672-201ENSMUST00000206944 1098 ntBASIC14.24□□□□□ -0.13
Slc6a1P31648 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.24□□□□□ -0.13
Slc6a1P31648 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Slc6a1P31648 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a1P31648 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Slc6a1P31648 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.24□□□□□ -0.13
Slc6a1P31648 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a1P31648 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a1P31648 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a1P31648 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a1P31648 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a1P31648 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a1P31648 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Slc6a1P31648 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Slc6a1P31648 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Slc6a1P31648 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a1P31648 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a1P31648 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a1P31648 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a1P31648 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.23□□□□□ -0.13
Slc6a1P31648 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a1P31648 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a1P31648 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a1P31648 Trmt13-210ENSMUST00000198454 880 ntBASIC14.23□□□□□ -0.13
Slc6a1P31648 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a1P31648 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a1P31648 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a1P31648 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a1P31648 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a1P31648 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Slc6a1P31648 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.23□□□□□ -0.13
Slc6a1P31648 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.23□□□□□ -0.13
Slc6a1P31648 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a1P31648 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Slc6a1P31648 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a1P31648 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a1P31648 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.22□□□□□ -0.13
Slc6a1P31648 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a1P31648 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a1P31648 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a1P31648 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a1P31648 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a1P31648 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.22□□□□□ -0.13
Slc6a1P31648 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a1P31648 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a1P31648 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a1P31648 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a1P31648 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a1P31648 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a1P31648 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a1P31648 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a1P31648 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a1P31648 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a1P31648 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a1P31648 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a1P31648 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.21□□□□□ -0.13
Slc6a1P31648 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc6a1P31648 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.21□□□□□ -0.13
Slc6a1P31648 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc6a1P31648 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Slc6a1P31648 Gm13168-201ENSMUST00000121771 632 ntBASIC14.21□□□□□ -0.13
Slc6a1P31648 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.21□□□□□ -0.13
Slc6a1P31648 Gm44549-201ENSMUST00000208351 577 ntBASIC14.21□□□□□ -0.13
Slc6a1P31648 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Slc6a1P31648 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Slc6a1P31648 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Slc6a1P31648 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc6a1P31648 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc6a1P31648 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Slc6a1P31648 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms