Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vcam1P29533 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vcam1P29533 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vcam1P29533 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Vcam1P29533 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vcam1P29533 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vcam1P29533 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vcam1P29533 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vcam1P29533 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vcam1P29533 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.92■□□□□ 0.62
Vcam1P29533 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Vcam1P29533 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vcam1P29533 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Vcam1P29533 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.91■□□□□ 0.62
Vcam1P29533 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vcam1P29533 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vcam1P29533 Gm4459-201ENSMUST00000118750 468 ntBASIC18.91■□□□□ 0.62
Vcam1P29533 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Vcam1P29533 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vcam1P29533 Gm4535-201ENSMUST00000182274 558 ntBASIC18.91■□□□□ 0.62
Vcam1P29533 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.91■□□□□ 0.62
Vcam1P29533 Gm18206-201ENSMUST00000207027 926 ntBASIC18.91■□□□□ 0.62
Vcam1P29533 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vcam1P29533 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Vcam1P29533 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vcam1P29533 Gm10355-201ENSMUST00000097146 517 ntBASIC18.91■□□□□ 0.62
Vcam1P29533 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Vcam1P29533 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vcam1P29533 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Vcam1P29533 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.91■□□□□ 0.62
Vcam1P29533 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Vcam1P29533 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vcam1P29533 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vcam1P29533 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Vcam1P29533 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vcam1P29533 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Vcam1P29533 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Vcam1P29533 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vcam1P29533 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vcam1P29533 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vcam1P29533 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.9■□□□□ 0.62
Vcam1P29533 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.9■□□□□ 0.62
Vcam1P29533 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.9■□□□□ 0.62
Vcam1P29533 Gm25406-201ENSMUST00000157599 105 ntBASIC18.9■□□□□ 0.62
Vcam1P29533 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.9■□□□□ 0.62
Vcam1P29533 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.9■□□□□ 0.62
Vcam1P29533 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vcam1P29533 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Vcam1P29533 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.9■□□□□ 0.62
Vcam1P29533 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Vcam1P29533 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Vcam1P29533 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Vcam1P29533 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.89■□□□□ 0.61
Vcam1P29533 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vcam1P29533 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vcam1P29533 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vcam1P29533 Gm12497-201ENSMUST00000138778 237 ntBASIC18.89■□□□□ 0.61
Vcam1P29533 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vcam1P29533 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Vcam1P29533 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Vcam1P29533 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Vcam1P29533 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.89■□□□□ 0.61
Vcam1P29533 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.89■□□□□ 0.61
Vcam1P29533 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vcam1P29533 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Vcam1P29533 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vcam1P29533 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vcam1P29533 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Vcam1P29533 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vcam1P29533 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.89■□□□□ 0.61
Vcam1P29533 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vcam1P29533 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Vcam1P29533 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vcam1P29533 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vcam1P29533 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Vcam1P29533 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.88■□□□□ 0.61
Vcam1P29533 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Vcam1P29533 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Vcam1P29533 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vcam1P29533 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vcam1P29533 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.88■□□□□ 0.61
Vcam1P29533 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Vcam1P29533 Gm8097-201ENSMUST00000117903 829 ntBASIC18.88■□□□□ 0.61
Vcam1P29533 Gm1401-201ENSMUST00000122048 772 ntBASIC18.88■□□□□ 0.61
Vcam1P29533 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.88■□□□□ 0.61
Vcam1P29533 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.88■□□□□ 0.61
Vcam1P29533 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.88■□□□□ 0.61
Vcam1P29533 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.88■□□□□ 0.61
Vcam1P29533 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.88■□□□□ 0.61
Vcam1P29533 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.88■□□□□ 0.61
Vcam1P29533 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vcam1P29533 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Vcam1P29533 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vcam1P29533 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.88■□□□□ 0.61
Vcam1P29533 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Vcam1P29533 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vcam1P29533 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vcam1P29533 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vcam1P29533 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Vcam1P29533 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms