Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp53P15975 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp53P15975 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Usp53P15975 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Usp53P15975 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Usp53P15975 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp53P15975 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.06■□□□□ 0.64
Usp53P15975 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp53P15975 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Usp53P15975 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Usp53P15975 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Usp53P15975 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.06■□□□□ 0.64
Usp53P15975 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp53P15975 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp53P15975 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp53P15975 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Usp53P15975 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Usp53P15975 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.05■□□□□ 0.64
Usp53P15975 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Usp53P15975 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
Usp53P15975 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp53P15975 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Usp53P15975 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Usp53P15975 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Usp53P15975 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.05■□□□□ 0.64
Usp53P15975 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp53P15975 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp53P15975 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Usp53P15975 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp53P15975 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp53P15975 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp53P15975 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Usp53P15975 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp53P15975 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
Usp53P15975 Gm7153-201ENSMUST00000117092 455 ntBASIC19.04■□□□□ 0.64
Usp53P15975 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp53P15975 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp53P15975 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.04■□□□□ 0.64
Usp53P15975 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
Usp53P15975 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.04■□□□□ 0.64
Usp53P15975 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp53P15975 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp53P15975 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Usp53P15975 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
Usp53P15975 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Usp53P15975 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp53P15975 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp53P15975 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.03■□□□□ 0.64
Usp53P15975 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.03■□□□□ 0.64
Usp53P15975 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Usp53P15975 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp53P15975 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp53P15975 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp53P15975 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp53P15975 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.03■□□□□ 0.64
Usp53P15975 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp53P15975 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp53P15975 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp53P15975 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp53P15975 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Usp53P15975 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.03■□□□□ 0.64
Usp53P15975 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp53P15975 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp53P15975 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Usp53P15975 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp53P15975 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp53P15975 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp53P15975 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Usp53P15975 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp53P15975 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp53P15975 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Usp53P15975 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Usp53P15975 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp53P15975 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp53P15975 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC19.02■□□□□ 0.64
Usp53P15975 Gm13312-201ENSMUST00000119631 718 ntBASIC19.02■□□□□ 0.64
Usp53P15975 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Usp53P15975 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Usp53P15975 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Usp53P15975 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Usp53P15975 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp53P15975 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Usp53P15975 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp53P15975 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.02■□□□□ 0.64
Usp53P15975 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Usp53P15975 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp53P15975 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp53P15975 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Usp53P15975 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Usp53P15975 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.02■□□□□ 0.63
Usp53P15975 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Usp53P15975 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
Usp53P15975 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp53P15975 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp53P15975 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp53P15975 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Usp53P15975 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.01■□□□□ 0.63
Usp53P15975 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp53P15975 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp53P15975 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms