Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rb1P13405 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rb1P13405 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rb1P13405 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rb1P13405 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rb1P13405 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.84■□□□□ 0.29
Rb1P13405 Gm27742-201ENSMUST00000184667 60 ntBASIC16.84■□□□□ 0.29
Rb1P13405 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.84■□□□□ 0.29
Rb1P13405 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rb1P13405 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rb1P13405 Gm7461-201ENSMUST00000058918 827 ntBASIC16.84■□□□□ 0.29
Rb1P13405 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rb1P13405 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rb1P13405 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rb1P13405 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.84■□□□□ 0.29
Rb1P13405 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Rb1P13405 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rb1P13405 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rb1P13405 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rb1P13405 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rb1P13405 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rb1P13405 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rb1P13405 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rb1P13405 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.84■□□□□ 0.29
Rb1P13405 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rb1P13405 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rb1P13405 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rb1P13405 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rb1P13405 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.83■□□□□ 0.28
Rb1P13405 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rb1P13405 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rb1P13405 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rb1P13405 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.83■□□□□ 0.28
Rb1P13405 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rb1P13405 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Rb1P13405 Gm6623-201ENSMUST00000173570 544 ntBASIC16.83■□□□□ 0.28
Rb1P13405 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rb1P13405 Gm8969-201ENSMUST00000199694 526 ntBASIC16.83■□□□□ 0.28
Rb1P13405 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rb1P13405 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.83■□□□□ 0.28
Rb1P13405 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rb1P13405 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rb1P13405 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rb1P13405 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rb1P13405 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rb1P13405 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rb1P13405 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rb1P13405 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.82■□□□□ 0.28
Rb1P13405 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Rb1P13405 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rb1P13405 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rb1P13405 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rb1P13405 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rb1P13405 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.82■□□□□ 0.28
Rb1P13405 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.82■□□□□ 0.28
Rb1P13405 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rb1P13405 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rb1P13405 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Rb1P13405 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rb1P13405 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Rb1P13405 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rb1P13405 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.82■□□□□ 0.28
Rb1P13405 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
Rb1P13405 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.82■□□□□ 0.28
Rb1P13405 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rb1P13405 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rb1P13405 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rb1P13405 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rb1P13405 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rb1P13405 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.81■□□□□ 0.28
Rb1P13405 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rb1P13405 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rb1P13405 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rb1P13405 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rb1P13405 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Rb1P13405 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rb1P13405 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rb1P13405 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Rb1P13405 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.81■□□□□ 0.28
Rb1P13405 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.81■□□□□ 0.28
Rb1P13405 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.81■□□□□ 0.28
Rb1P13405 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.81■□□□□ 0.28
Rb1P13405 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rb1P13405 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Rb1P13405 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rb1P13405 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Rb1P13405 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rb1P13405 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rb1P13405 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rb1P13405 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rb1P13405 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rb1P13405 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rb1P13405 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rb1P13405 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rb1P13405 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Rb1P13405 Actl10-202ENSMUST00000226583 1501 ntBASIC16.8■□□□□ 0.28
Rb1P13405 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rb1P13405 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rb1P13405 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rb1P13405 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms