Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hdac3O88895 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hdac3O88895 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hdac3O88895 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hdac3O88895 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.76□□□□□ -0.05
Hdac3O88895 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hdac3O88895 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hdac3O88895 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hdac3O88895 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Hdac3O88895 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hdac3O88895 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hdac3O88895 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hdac3O88895 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hdac3O88895 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hdac3O88895 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hdac3O88895 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.76□□□□□ -0.05
Hdac3O88895 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Hdac3O88895 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Hdac3O88895 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.76□□□□□ -0.05
Hdac3O88895 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hdac3O88895 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hdac3O88895 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Hdac3O88895 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hdac3O88895 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hdac3O88895 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hdac3O88895 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hdac3O88895 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hdac3O88895 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Hdac3O88895 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hdac3O88895 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hdac3O88895 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hdac3O88895 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hdac3O88895 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hdac3O88895 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hdac3O88895 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Hdac3O88895 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hdac3O88895 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hdac3O88895 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hdac3O88895 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hdac3O88895 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.75□□□□□ -0.05
Hdac3O88895 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hdac3O88895 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hdac3O88895 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hdac3O88895 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hdac3O88895 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hdac3O88895 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hdac3O88895 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.75□□□□□ -0.05
Hdac3O88895 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hdac3O88895 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hdac3O88895 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hdac3O88895 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hdac3O88895 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hdac3O88895 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.75□□□□□ -0.05
Hdac3O88895 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hdac3O88895 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hdac3O88895 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hdac3O88895 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hdac3O88895 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hdac3O88895 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hdac3O88895 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hdac3O88895 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hdac3O88895 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Hdac3O88895 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hdac3O88895 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hdac3O88895 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hdac3O88895 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hdac3O88895 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Hdac3O88895 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Hdac3O88895 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hdac3O88895 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Hdac3O88895 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hdac3O88895 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.74□□□□□ -0.05
Hdac3O88895 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hdac3O88895 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Hdac3O88895 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hdac3O88895 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hdac3O88895 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Hdac3O88895 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hdac3O88895 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Hdac3O88895 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Hdac3O88895 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hdac3O88895 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hdac3O88895 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hdac3O88895 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hdac3O88895 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hdac3O88895 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Hdac3O88895 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Hdac3O88895 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Hdac3O88895 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hdac3O88895 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hdac3O88895 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.73□□□□□ -0.05
Hdac3O88895 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
Hdac3O88895 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hdac3O88895 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.73□□□□□ -0.05
Hdac3O88895 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hdac3O88895 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hdac3O88895 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.73□□□□□ -0.05
Hdac3O88895 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.73□□□□□ -0.05
Hdac3O88895 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hdac3O88895 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms