Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc4a4O88343 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.45■□□□□ 0.7
Slc4a4O88343 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Slc4a4O88343 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.45■□□□□ 0.7
Slc4a4O88343 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Slc4a4O88343 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc4a4O88343 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc4a4O88343 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc4a4O88343 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Slc4a4O88343 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc4a4O88343 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc4a4O88343 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Slc4a4O88343 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Slc4a4O88343 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Slc4a4O88343 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc4a4O88343 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Slc4a4O88343 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Slc4a4O88343 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Slc4a4O88343 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc4a4O88343 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc4a4O88343 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc4a4O88343 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Slc4a4O88343 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc4a4O88343 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc4a4O88343 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc4a4O88343 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.44■□□□□ 0.7
Slc4a4O88343 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Slc4a4O88343 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Slc4a4O88343 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.44■□□□□ 0.7
Slc4a4O88343 Gm44430-201ENSMUST00000203376 995 ntBASIC19.44■□□□□ 0.7
Slc4a4O88343 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc4a4O88343 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Slc4a4O88343 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc4a4O88343 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Slc4a4O88343 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc4a4O88343 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Slc4a4O88343 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc4a4O88343 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc4a4O88343 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc4a4O88343 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc4a4O88343 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc4a4O88343 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Slc4a4O88343 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.43■□□□□ 0.7
Slc4a4O88343 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.43■□□□□ 0.7
Slc4a4O88343 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Slc4a4O88343 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.43■□□□□ 0.7
Slc4a4O88343 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Slc4a4O88343 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Slc4a4O88343 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc4a4O88343 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc4a4O88343 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.43■□□□□ 0.7
Slc4a4O88343 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Slc4a4O88343 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Slc4a4O88343 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc4a4O88343 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Slc4a4O88343 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Slc4a4O88343 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc4a4O88343 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.42■□□□□ 0.7
Slc4a4O88343 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc4a4O88343 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Slc4a4O88343 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Slc4a4O88343 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Slc4a4O88343 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.42■□□□□ 0.7
Slc4a4O88343 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Slc4a4O88343 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.42■□□□□ 0.7
Slc4a4O88343 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.42■□□□□ 0.7
Slc4a4O88343 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Slc4a4O88343 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc4a4O88343 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc4a4O88343 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
Slc4a4O88343 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc4a4O88343 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc4a4O88343 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc4a4O88343 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc4a4O88343 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc4a4O88343 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc4a4O88343 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc4a4O88343 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc4a4O88343 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc4a4O88343 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc4a4O88343 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Slc4a4O88343 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Slc4a4O88343 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc4a4O88343 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Slc4a4O88343 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc4a4O88343 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc4a4O88343 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Slc4a4O88343 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.41■□□□□ 0.7
Slc4a4O88343 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Slc4a4O88343 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.41■□□□□ 0.7
Slc4a4O88343 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Slc4a4O88343 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Slc4a4O88343 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc4a4O88343 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Slc4a4O88343 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Slc4a4O88343 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc4a4O88343 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc4a4O88343 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc4a4O88343 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc4a4O88343 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms