Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SncaO55042 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SncaO55042 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
SncaO55042 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SncaO55042 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SncaO55042 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SncaO55042 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SncaO55042 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SncaO55042 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SncaO55042 Gm5643-201ENSMUST00000117081 966 ntBASIC13.67□□□□□ -0.22
SncaO55042 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC13.67□□□□□ -0.22
SncaO55042 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.67□□□□□ -0.22
SncaO55042 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SncaO55042 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SncaO55042 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SncaO55042 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
SncaO55042 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SncaO55042 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SncaO55042 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SncaO55042 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SncaO55042 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SncaO55042 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SncaO55042 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SncaO55042 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SncaO55042 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SncaO55042 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SncaO55042 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SncaO55042 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SncaO55042 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SncaO55042 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SncaO55042 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SncaO55042 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SncaO55042 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SncaO55042 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SncaO55042 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.66□□□□□ -0.22
SncaO55042 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
SncaO55042 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SncaO55042 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.66□□□□□ -0.22
SncaO55042 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SncaO55042 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SncaO55042 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SncaO55042 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SncaO55042 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
SncaO55042 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SncaO55042 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SncaO55042 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SncaO55042 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
SncaO55042 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC13.66□□□□□ -0.22
SncaO55042 Gm9731-201ENSMUST00000209480 747 ntBASIC13.66□□□□□ -0.22
SncaO55042 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SncaO55042 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SncaO55042 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SncaO55042 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
SncaO55042 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SncaO55042 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SncaO55042 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SncaO55042 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SncaO55042 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SncaO55042 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SncaO55042 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SncaO55042 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SncaO55042 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.65□□□□□ -0.22
SncaO55042 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
SncaO55042 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SncaO55042 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SncaO55042 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SncaO55042 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SncaO55042 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SncaO55042 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SncaO55042 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SncaO55042 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SncaO55042 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SncaO55042 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SncaO55042 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SncaO55042 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SncaO55042 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SncaO55042 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SncaO55042 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SncaO55042 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SncaO55042 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
SncaO55042 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.65□□□□□ -0.22
SncaO55042 Slc35b2-207ENSMUST00000226086 850 ntBASIC13.65□□□□□ -0.22
SncaO55042 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SncaO55042 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SncaO55042 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SncaO55042 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SncaO55042 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SncaO55042 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SncaO55042 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SncaO55042 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SncaO55042 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SncaO55042 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SncaO55042 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SncaO55042 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.65□□□□□ -0.22
SncaO55042 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
SncaO55042 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SncaO55042 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SncaO55042 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SncaO55042 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SncaO55042 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms