Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ChkaO54804 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ChkaO54804 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ChkaO54804 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.67■□□□□ 0.26
ChkaO54804 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ChkaO54804 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
ChkaO54804 Gm7370-201ENSMUST00000219471 767 ntBASIC16.67■□□□□ 0.26
ChkaO54804 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
ChkaO54804 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ChkaO54804 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.67■□□□□ 0.26
ChkaO54804 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ChkaO54804 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ChkaO54804 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ChkaO54804 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ChkaO54804 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
ChkaO54804 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ChkaO54804 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ChkaO54804 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ChkaO54804 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ChkaO54804 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
ChkaO54804 Actl10-202ENSMUST00000226583 1501 ntBASIC16.66■□□□□ 0.26
ChkaO54804 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ChkaO54804 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ChkaO54804 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.66■□□□□ 0.26
ChkaO54804 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ChkaO54804 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ChkaO54804 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ChkaO54804 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.66■□□□□ 0.26
ChkaO54804 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
ChkaO54804 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ChkaO54804 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ChkaO54804 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
ChkaO54804 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ChkaO54804 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ChkaO54804 Gm5417-201ENSMUST00000079706 384 ntBASIC16.66■□□□□ 0.26
ChkaO54804 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ChkaO54804 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ChkaO54804 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ChkaO54804 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ChkaO54804 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ChkaO54804 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ChkaO54804 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.66■□□□□ 0.26
ChkaO54804 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.66■□□□□ 0.26
ChkaO54804 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ChkaO54804 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
ChkaO54804 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.66■□□□□ 0.26
ChkaO54804 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ChkaO54804 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ChkaO54804 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ChkaO54804 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ChkaO54804 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
ChkaO54804 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ChkaO54804 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ChkaO54804 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.65■□□□□ 0.26
ChkaO54804 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ChkaO54804 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ChkaO54804 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ChkaO54804 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ChkaO54804 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.65■□□□□ 0.26
ChkaO54804 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.65■□□□□ 0.26
ChkaO54804 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.65■□□□□ 0.26
ChkaO54804 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.65■□□□□ 0.26
ChkaO54804 Gm10252-201ENSMUST00000209541 832 ntBASIC16.65■□□□□ 0.26
ChkaO54804 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ChkaO54804 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ChkaO54804 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ChkaO54804 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ChkaO54804 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ChkaO54804 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ChkaO54804 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ChkaO54804 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ChkaO54804 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ChkaO54804 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ChkaO54804 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
ChkaO54804 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ChkaO54804 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ChkaO54804 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ChkaO54804 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ChkaO54804 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.64■□□□□ 0.25
ChkaO54804 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
ChkaO54804 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ChkaO54804 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ChkaO54804 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ChkaO54804 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ChkaO54804 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
ChkaO54804 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ChkaO54804 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ChkaO54804 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ChkaO54804 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ChkaO54804 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ChkaO54804 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ChkaO54804 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ChkaO54804 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.64■□□□□ 0.25
ChkaO54804 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ChkaO54804 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ChkaO54804 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
ChkaO54804 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ChkaO54804 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ChkaO54804 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ChkaO54804 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms