Protein–RNA interactions for Protein: O35906

Spib, Transcription factor Spi-B, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpibO35906 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SpibO35906 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SpibO35906 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SpibO35906 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SpibO35906 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SpibO35906 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SpibO35906 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SpibO35906 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.12■□□□□ 0.49
SpibO35906 Gm12497-201ENSMUST00000138778 237 ntBASIC18.12■□□□□ 0.49
SpibO35906 Gm25406-201ENSMUST00000157599 105 ntBASIC18.12■□□□□ 0.49
SpibO35906 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC18.12■□□□□ 0.49
SpibO35906 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.12■□□□□ 0.49
SpibO35906 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SpibO35906 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SpibO35906 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.12■□□□□ 0.49
SpibO35906 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SpibO35906 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SpibO35906 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SpibO35906 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SpibO35906 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SpibO35906 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SpibO35906 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SpibO35906 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SpibO35906 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SpibO35906 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SpibO35906 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.11■□□□□ 0.49
SpibO35906 Gm15173-201ENSMUST00000122049 433 ntBASIC18.11■□□□□ 0.49
SpibO35906 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.11■□□□□ 0.49
SpibO35906 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.11■□□□□ 0.49
SpibO35906 Gm6089-201ENSMUST00000197666 938 ntBASIC18.11■□□□□ 0.49
SpibO35906 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SpibO35906 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SpibO35906 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SpibO35906 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
SpibO35906 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.11■□□□□ 0.49
SpibO35906 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SpibO35906 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.11■□□□□ 0.49
SpibO35906 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SpibO35906 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.11■□□□□ 0.49
SpibO35906 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SpibO35906 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SpibO35906 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SpibO35906 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.1■□□□□ 0.49
SpibO35906 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SpibO35906 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SpibO35906 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SpibO35906 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SpibO35906 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SpibO35906 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.1■□□□□ 0.49
SpibO35906 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SpibO35906 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.1■□□□□ 0.49
SpibO35906 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SpibO35906 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SpibO35906 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SpibO35906 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SpibO35906 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.1■□□□□ 0.49
SpibO35906 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SpibO35906 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SpibO35906 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SpibO35906 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SpibO35906 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SpibO35906 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SpibO35906 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SpibO35906 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SpibO35906 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SpibO35906 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SpibO35906 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SpibO35906 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SpibO35906 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SpibO35906 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.09■□□□□ 0.49
SpibO35906 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.09■□□□□ 0.49
SpibO35906 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SpibO35906 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SpibO35906 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.09■□□□□ 0.49
SpibO35906 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SpibO35906 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SpibO35906 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SpibO35906 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SpibO35906 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SpibO35906 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.08■□□□□ 0.49
SpibO35906 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SpibO35906 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SpibO35906 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SpibO35906 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.08■□□□□ 0.49
SpibO35906 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SpibO35906 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SpibO35906 Gm11779-201ENSMUST00000118541 368 ntBASIC18.08■□□□□ 0.48
SpibO35906 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SpibO35906 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SpibO35906 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SpibO35906 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SpibO35906 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SpibO35906 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SpibO35906 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SpibO35906 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.08■□□□□ 0.48
SpibO35906 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
SpibO35906 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.08■□□□□ 0.48
SpibO35906 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SpibO35906 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SpibO35906 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms